Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0089 ATGGGATTCTGGGGGATTGAAGTGAAACCTGGAAAATCTACTCCTTATCATGCTGACAATGTGCAAGGAAAGCTTCGCGTCACTCAGGCTACTCTAGGAATTGGTTCATCGGCGGAGAAAAGCATTCTTCAGTGCTCTTCGGGACACAAAAGTCCAGTTTTCTTGTGTTCATTGCTACCCAATAAGATTGAGTCATGCCCTTTGAATCTTGAGTTTGACGATGACGACTTAGTTGCATTCTCAGTGGTTGGTCCACGAAGCATCCATCTTTCTGGTTATTTTGTGACTGTTGATGGAGATGACTATGAATATGATTCATTTGATGAGGATGCTGAGGGAAGCGAGACTGAGGAGTCTTCAGAACATGATTCTGAGGATGGATATGACTTCATTGATGATAGTGACGCTGACATGTACCCATCTTCGCACATCCCGAATAGTGGCGTTGTTATTGAAGAAATAGTGGACGACGATAAACCTGAAAGTGGAGATGACCCAACTAAGCAATTGAAGAAAAAGAAGCAGGTTGCTCACTTGAAAGAGGACAAAAGTTCTCACCTTCCAATTGTCGTTAGGGGTGAGACTGTTCCCCCTAATCTGGAAGATGAAGATGATGCTGAGGAAAATGAAGACAAAGATGGTTTTCCAATTTCTGTGGCAGAGAAAGGTAAATCTGAGAGTCCAAAGGAAGAAACTGAAATAAAAGAAGAACAAGCACATAAGAAAACTGAAAAAGCCAATAAGAGGGCAAAACAGGTTGATCATTCTGCTAGCATAAAACGAAAAGTTGAAAATGCTGAGGAAGATGAGCAACAGCAAGATGGGAAAAAGAAGAAAAAGAGAAAAGATAAGTTGAAAGAACATGGTAAAGGGGAAAGTTCTCATGCGTCTGACAATATTAATGAGACTAATGAAACTACACCAGATGAAAAGCATCCCGAGGAGGTTAAAACTACAGTCGACGTGAATGATGTTTCTCATGCAAAGGATGGACAGCCTCTATCTAATAATGAGGTCCTTGTTGAGAAGAAAAACAAGAAGAAGAATAAGAAGAAAACGACCAAAGAGTCTGAAGAGGCAACTACTCCAAATCAAATTGCTAACACTGTTGAAAATAAGGATTTATCCATCTCAGAGAAATCAGGGAAAAAACAGACTGAAGACAAGCCATCTCAAGTTAGAAGCTTTGCAAATGGGTTGGTTATTGAGGAGTTATCTACGGGTAAACCAGATGGCAAAAGTGCTACTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAACTAAAAAAGAATGGAAAAATATTTGACTCAAATGTGGGGAGAGCAACATTTAAATTTCGCCTTGGTTTAGGACAAGTCATCAAGGGGTGGGAAGTTGGAGTCAATGGGATGAGGATTGGTGACAAAAGAAGAATCACAGTTCCACCATCTATGGGGTATGGAGACAAACGTGCTGGGAGTATACCACCGAATTCTTGGCTTGTATTTGATGTGGAATTGGTTAATGTTGGTGGCTAA 1521 0.4057 MGFWGIEVKPGKSTPYHADNVQGKLRVTQATLGIGSSAEKSILQCSSGHKSPVFLCSLLPNKIESCPLNLEFDDDDLVAFSVVGPRSIHLSGYFVTVDGDDYEYDSFDEDAEGSETEESSEHDSEDGYDFIDDSDADMYPSSHIPNSGVVIEEIVDDDKPESGDDPTKQLKKKKQVAHLKEDKSSHLPIVVRGETVPPNLEDEDDAEENEDKDGFPISVAEKGKSESPKEETEIKEEQAHKKTEKANKRAKQVDHSASIKRKVENAEEDEQQQDGKKKKKRKDKLKEHGKGESSHASDNINETNETTPDEKHPEEVKTTVDVNDVSHAKDGQPLSNNEVLVEKKNKKKNKKKTTKESEEATTPNQIANTVENKDLSISEKSGKKQTEDKPSQVRSFANGLVIEELSTGKPDGKSATPGKKVSVKYIGKLKKNGKIFDSNVGRATFKFRLGLGQVIKGWEVGVNGMRIGDKRRITVPPSMGYGDKRAGSIPPNSWLVFDVELVNVGG* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0089 506 MobiDBLite consensus disorder prediction 304 324 - -
Lan17g0089 506 SUPERFAMILY FKBP-like 378 504 - -
Lan17g0089 506 Coils Coil 263 283 - -
Lan17g0089 506 MobiDBLite consensus disorder prediction 152 188 - -
Lan17g0089 506 MobiDBLite consensus disorder prediction 104 394 - -
Lan17g0089 506 MobiDBLite consensus disorder prediction 104 133 - -
Lan17g0089 506 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Lan17g0089 506 PIRSF FK506-bp_FPR3 46 188 IPR023566 GO:0003755
Lan17g0089 506 PIRSF FK506-bp_FPR3 290 505 IPR023566 GO:0003755
Lan17g0089 506 PIRSF FK506-bp_FPR3 152 330 IPR023566 GO:0003755
Lan17g0089 506 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 413 502 IPR001179 GO:0003755
Lan17g0089 506 MobiDBLite consensus disorder prediction 359 375 - -
Lan17g0089 506 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 418 505 IPR001179 GO:0003755
Lan17g0089 506 Gene3D Nucleoplasmin core domain 1 100 - -
Lan17g0089 506 Gene3D - 391 505 IPR046357 GO:0003755
Lan17g0089 506 PANTHER PEPTIDYLPROLYL ISOMERASE 1 255 - -
Lan17g0089 506 PANTHER PEPTIDYLPROLYL ISOMERASE 267 504 - -
Lan17g0089 506 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 267 504 - -
Lan17g0089 506 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 255 - -
Lan17g0089 506 MobiDBLite consensus disorder prediction 376 390 - -
Lan17g0089 506 MobiDBLite consensus disorder prediction 212 277 - -
Lan17g0089 506 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0089 Lan-Chr17 492329 496984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0089 418 504 Calmodulin-binding Proteins AT5G48570 34.043 3.93e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0089 K14826 - gmx:100792856 664.84