Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0085 ATGGGGTGCATATGCTCAAAAGAATCATCGTCGGACAAAGATAGAGTTGATGAGTATGAGAAGAAGGAGAATGAGTTGAAAAAGCCTTCAGTACAATTGGTTGCTCCTAATGTCTCAAATGCAGAGTTAAATAGCAATGATGATGATGGTTCGGTGCCACATATGGCTAAGTCATATTCACAAATAATCAAGAGTTGTGTCCCAGCACTATCACTATTAGAAGATAAAAACAATAACAACAACAACAACCCTCTAGATGTTGTTGTAAAACCGTCAGTAAAAGGACAACAGCATCGACATCTGACATGTATAACATTAGGTGCCTGTGAAAGAAAGCCAATGATGAGTAGAATACTAAGTGTGCCACATGGTCCAGGAGGACATGTTGATGATGCATGGCCATCATGGTTATCTTCAGTTGCTGGAGAAGCCATCAAAGGATGGATTCCTAGAAGGGCAGATTCTTTCGAAAAATTGGACCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAGAGCTCGTGACCTTGAAACAGGTAAAATAGTGGCTATGAAGAAAGTTCGATTTTCAAGTTCGGATCCTGAGAGTGTACGTTTCATGGCAAGGGAAATCTATATTTTGCGCCAACTTGACCATCCAAATGTTATGAAGCTTGAAGGTCTTGTCACTTCAACAACTTCCACCAGTTTGTACCTTGTCTTTGAATATATGGAACATGATCTTGCTGGATTAGCAGCACTACCTGGCGTAAAGTTCACTGAACCACAGATTAAATGTTACATGCAACAACTGCTTTGTGGGCTTGAACACTGCCATCTACGTGGTGTGCTTCACCGTGATATCAAGGGTTCAAATCTTTTGATTGACAACAATGGAAATCTTAAGATTGCAGATTTCGGTCTTGCAACTGTTTATGACCCGGATAAAAAGCATGCATTGACTAGCCGAGTTGTGACACTATGGTATAGGGCACCTGAGCTTTTGCTCGGTGCTACTGATTATGGAGCTGGAATTGACTTGTGGAGTGTTGGTTGCATTCTAGCAGAATTGCTGGTAGGGAAACCTATTATGCCCGGAAGAACTGAGGTTGAACAAATGCATAAGATTTTTAAGCTTTGTGGTTCCCCATCCGAAGACTATTGGCAGAGAACAAAACTTCCACATTCAACAAGTTTCAAACCACAACACTGTTACAGACGCAATATCTTCGAAACATTTAAAAGTTTTCCTTCTCCAGCATTAGCTCTTGTTGATAAGCTCCTCTCAATAGAACCGGAAAAGCGAGGATCTACAACTTCGGCACTTAAGAGTGAGTTTTTCACTACAAATCCCATGCCATGTGATCCCTCGAGTTTACCGAAGTTTCCACCAACCAAGGAGTTTGATGCTAGGCATAGAAACAAGGATGAAATGAGAAAAAACAACGATGCTGTGAAAGGGCGTGGACCGGTATCTGTTTTAAGAGGAACAGGAGATTCCAAAGGACTGAGATCACATGAGGGAGATCTAACTGTGCTGGGCAAGTCACGTAGTCGAATTTGCCGTGTTAAAAATCGATCACGGGAGGAAGGTGGATCACTCCACCATAAGAGGGAAGCAACAAAAGTACCACTACAAAATGGTTATACACATTCTAATTCAATGATGCATGGAACTGCAACAGGAACATCCTCAACACATAAGATAACAGACATGTCTATGAAGACTTCAGAGTTAAGGACACAAAGTGAAAATCATGTAACAGATTTCTCTGCCTCTTCCATTAAAAAAGAGCAAGGAGGCTCTGGCCGGGGGTATGTAGCCAAGAAAAATAGGATCCACTACTCTGGACCATTGGTGCCTCCAGGTGGAAACATTGATGACATGCTGAAAGAGCATGAAAGATTAATGCAAGAAGCTTTCAGAAGTGTGAAGAAGACCAATCATAGAAATTAA 1935 0.415 MGCICSKESSSDKDRVDEYEKKENELKKPSVQLVAPNVSNAELNSNDDDGSVPHMAKSYSQIIKSCVPALSLLEDKNNNNNNNPLDVVVKPSVKGQQHRHLTCITLGACERKPMMSRILSVPHGPGGHVDDAWPSWLSSVAGEAIKGWIPRRADSFEKLDQIGQGAYSSVHRARDLETGKIVAMKKVRFSSSDPESVRFMAREIYILRQLDHPNVMKLEGLVTSTTSTSLYLVFEYMEHDLAGLAALPGVKFTEPQIKCYMQQLLCGLEHCHLRGVLHRDIKGSNLLIDNNGNLKIADFGLATVYDPDKKHALTSRVVTLWYRAPELLLGATDYGAGIDLWSVGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKLPHSTSFKPQHCYRRNIFETFKSFPSPALALVDKLLSIEPEKRGSTTSALKSEFFTTNPMPCDPSSLPKFPPTKEFDARHRNKDEMRKNNDAVKGRGPVSVLRGTGDSKGLRSHEGDLTVLGKSRSRICRVKNRSREEGGSLHHKREATKVPLQNGYTHSNSMMHGTATGTSSTHKITDMSMKTSELRTQSENHVTDFSASSIKKEQGGSGRGYVAKKNRIHYSGPLVPPGGNIDDMLKEHERLMQEAFRSVKKTNHRN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0085 644 SUPERFAMILY Protein kinase-like (PK-like) 150 448 IPR011009 -
Lan17g0085 644 Coils Coil 623 643 - -
Lan17g0085 644 Gene3D Transferase(Phosphotransferase) domain 1 244 480 - -
Lan17g0085 644 SMART serkin_6 156 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0085 644 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 86 638 - -
Lan17g0085 644 MobiDBLite consensus disorder prediction 1 30 - -
Lan17g0085 644 CDD STKc_CDK9_like 156 440 - -
Lan17g0085 644 PANTHER CELL DIVISION PROTEIN KINASE 86 638 - -
Lan17g0085 644 MobiDBLite consensus disorder prediction 465 499 - -
Lan17g0085 644 Pfam Protein kinase domain 156 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0085 644 ProSiteProfiles Protein kinase domain profile. 156 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0085 644 MobiDBLite consensus disorder prediction 571 591 - -
Lan17g0085 644 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Lan17g0085 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lan17g0085 644 Gene3D Phosphorylase Kinase; domain 1 151 243 - -
Lan17g0085 644 MobiDBLite consensus disorder prediction 571 598 - -
Lan17g0085 644 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0085 Lan-Chr17 473654 478543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0085 148 479 Core Cell Cycle Gene Families AT5G10270 51.009 5.61e-118 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan17g0085 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0085 K08819 - gmx:100791743 818.535