Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0061 ATGGGAGCATCAGCATGTCTGCGACAAATTTGCAGCAACATCTTTGTCTCTAATTCTCATCATCAATTTCCCTTCCTCCGTTCCTTCTCTTCCAAGATTTTTGTTAAAGGTTTAGCATTCTCTACCACTGAACAAAATTTATCCGAAGCCTTTTCACAATTTGGAACTGTCCTCAATGCTAATATAGTTCTGAATAAAGCCAAGACTAGATCCAAGGGTTTTGGTTATGTCACTTTTGCTACAGAGGAAGAAGCCAGAGTGGCACAGATAGCCATGGATAAAAAGATATTACATGGACGTGTTTTATATGTGGACATGCAACCACCTAGGAAACAAAATAACTCATTTTCTGAGCAGGAGACAAATGATGTATGA 375 0.3867 MGASACLRQICSNIFVSNSHHQFPFLRSFSSKIFVKGLAFSTTEQNLSEAFSQFGTVLNANIVLNKAKTRSKGFGYVTFATEEEARVAQIAMDKKILHGRVLYVDMQPPRKQNNSFSEQETNDV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0061 124 PANTHER RNA RECOGNITION MOTIF 17 114 - -
Lan17g0061 124 PANTHER TRANSFORMER-2-RELATED 17 114 - -
Lan17g0061 124 SUPERFAMILY RNA-binding domain, RBD 22 115 IPR035979 GO:0003676
Lan17g0061 124 Gene3D - 13 121 IPR012677 -
Lan17g0061 124 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 109 IPR000504 GO:0003723
Lan17g0061 124 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 102 IPR000504 GO:0003723
Lan17g0061 124 SMART rrm1_1 32 105 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0061 Lan-Chr17 334835 336115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0061 33 106 C2H2 Transcription Factor Family AT2G19380 33.784 1.97e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0061 - K13195 gmx:100527061 128.642