Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0047 ATGAATAATAATAATAGCAATAGTAATAGTAGTAGGTCTCCTTTCACAGTGTCTCAGTGGCAAGAACTAGAACACCAAGCTTTGATTTACAAGTATATGCTGGCTGGTCTTCCTGTTCCACATGATCTTGTCATTCCAATCCTCAAGAATTTTCAATCCATTTCCACTTGTGAGAACAACATAGATCCCTCTTTTTTGAGTTACTGTTCCTTCTATGGGAAGAAGGTGGACCCAGAGCCAGGGAGATGCAGGAGGACTGATGGCAAGAAATGGAGGTGCTCCAAGGAAGCATACCCTGACTCAAAGTACTGCGAGCGACACATGCATCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACTATGGCACAATCATCATCTGCTGTGACATCAATGACTGTAACTAGTAGCAACAGTGCCACTGGAAACTTCCAGAACCTTACCACAAATGCCTTTGGTAATAGTACACAAGGTGTTGTTGGTTCTTCCACTAACCAAAGCCACTATCATCTTGATTCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATCTCAAAGGACATAAATCTGAGGGTGGTGAACAAAGTTTGTTTCCAAAAGCTTTAGGAAGCAACAAGGTTATTGGAATGGAGTCACACATAGACAATACTTTTATGCCAATTGGAGATTCCTCATTCTCTACATCAAAATCAAAGAATAATAACAATAGTAATTCTATGTTGCAAGGTGATTATCTCCAACAATCATTTTTATCTAGTGAATTTGTGAAGCATGAGAGTCAATCTCTTAGACCTTTCTTTGATGAATGGCCTAAAAACAAGGATTCATGGTCTGGTCTTGAAGATGAGGAATCCAACCACAAAGGTTTCTCAACAACTCAACTATCAATGTCCATTCCTATTTCATCATCCAACTTCTCTACAACTACCTCTCAATCCCCACATAGTGGCATTTAG 966 0.4017 MNNNNSNSNSSRSPFTVSQWQELEHQALIYKYMLAGLPVPHDLVIPILKNFQSISTCENNIDPSFLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSAVTSMTVTSSNSATGNFQNLTTNAFGNSTQGVVGSSTNQSHYHLDSIPYGIPSKEYRYLKGHKSEGGEQSLFPKALGSNKVIGMESHIDNTFMPIGDSSFSTSKSKNNNNSNSMLQGDYLQQSFLSSEFVKHESQSLRPFFDEWPKNKDSWSGLEDEESNHKGFSTTQLSMSIPISSSNFSTTTSQSPHSGI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0047 321 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lan17g0047 321 MobiDBLite consensus disorder prediction 109 132 - -
Lan17g0047 321 Pfam QLQ 14 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0047 321 PANTHER - 11 313 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan17g0047 321 Pfam WRC 78 120 IPR014977 -
Lan17g0047 321 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0047 321 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0047 321 MobiDBLite consensus disorder prediction 118 132 - -
Lan17g0047 321 PANTHER GROWTH-REGULATING FACTOR 5 11 313 - -
Lan17g0047 321 MobiDBLite consensus disorder prediction 278 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0047 Lan-Chr17 245002 248087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0047 12 140 GRF Transcription Factor Family AT3G13960 52.672 3.67e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan17g0047 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0047 - - gmx:100797906 405.986