Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0038 ATGGATTCAGAAAGTGAAGAAGTTAGGACACCAAAGAGGGAGCTGGAAGCAGTAGGAGCTCTGAATTCAAAGATGAAGGGCGCCGGAAACCAGAGCAGTAAAGATATGATTTTCAGAGCTGATAAAATTGATCTGAAGAGTTTGGATGCTCAACTTGAAAAGCACTTAAGCCGGGTTTGGTCGAGAAGCAGCATTGATACAAAAAGGCCTAAAGAAGAATGGGAGATTGATTTGAGCAAATTGGATTTACGATACATTGTAGCTCATGGAGCATATGGTACTGTTTATAGGGGCACATATGATACCCGAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCCACTGCTGCTGAAACTGCTGCTTTACGGGCATCTTTTAAGCAAGAGGTTGCTGTCTGGCACAAACTTGACCACCCAAATGTCACAAAATTTGTTGGAGCTTCAATGGGCACTTCAAATCTGAAGATCCCTTCAAAAAACTCTTCGAATGTTGCTCAAGATTCTCTTCCTTCCAGGGCATGTTGTGTTATTGTTGATTTTGTCCCTGGTGGCACACTCAAACAATACTTGATAAGAAATAGGCGGAAGAAACTTGCTTATAAGATTGTGATTCAGCTGGCTTTGGACCTCTCCAGGGGTCTTAGCTATCTACATTCAAAGAAGATTGTTCATCGTGATGTGAAAACCGAAAATATGCTGCTAGATGGTAATCGGAATCTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTATGAATCCAAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCCGAGGTTCTGGATGGCAAGCCTTATAACAGGAGATGCGATGTCTATAGTTTTGGTATTTGCTTGTGGGAGATTTATTGTTGTGATATGCCTTACCCAGATCTAAGTTTTGCTGATGTGTCATCTGCAGTTGTTCGCCAGAATTTACGGCCAGAAATGCCGCGGTGTTGTCCAAGTGCCTTAGTGAATATAATGCGGAAATGTTGGGACGGGAATCCGAACAAACGTCCAGAAATGGTGGAGGTGGTGAGAATGCTGGAAGCACTTGATACAAGCAAAGGTGGTGGAATGATACCAGAAGATCAGGCTTCAGGTTGCTTTTGTTTTACCCCGACACGCGGTCCTTAA 1167 0.4353 MDSESEEVRTPKRELEAVGALNSKMKGAGNQSSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSSIDTKRPKEEWEIDLSKLDLRYIVAHGAYGTVYRGTYDTRDVAVKVLDWGEDGVATAAETAALRASFKQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKNSSNVAQDSLPSRACCVIVDFVPGGTLKQYLIRNRRKKLAYKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGNRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEMPRCCPSALVNIMRKCWDGNPNKRPEMVEVVRMLEALDTSKGGGMIPEDQASGCFCFTPTRGP* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0038 388 PRINTS Tyrosine kinase catalytic domain signature 182 195 IPR001245 GO:0004672|GO:0006468
Lan17g0038 388 PRINTS Tyrosine kinase catalytic domain signature 220 238 IPR001245 GO:0004672|GO:0006468
Lan17g0038 388 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Lan17g0038 388 PRINTS Tyrosine kinase catalytic domain signature 330 352 IPR001245 GO:0004672|GO:0006468
Lan17g0038 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Lan17g0038 388 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 19 382 - -
Lan17g0038 388 Gene3D Transferase(Phosphotransferase) domain 1 187 371 - -
Lan17g0038 388 MobiDBLite consensus disorder prediction 1 31 - -
Lan17g0038 388 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0038 388 Pfam Protein tyrosine and serine/threonine kinase 86 359 IPR001245 GO:0004672|GO:0006468
Lan17g0038 388 Gene3D Phosphorylase Kinase; domain 1 70 163 - -
Lan17g0038 388 CDD STKc_MAP3K-like 87 359 - -
Lan17g0038 388 SMART serkin_6 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0038 388 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Lan17g0038 388 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0038 Lan-Chr17 198953 202061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0038 1 388 MAP Kinase Kinase Kinase AT3G22750 75.773 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan17g0038 PK_Tyr_Ser-Thr 3.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0038 - - gmx:100803917 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0038 17 198953 202061 Lan18g1166 18 16431739 16434570 LSH
Lan17g0038 17 198953 202061 Lan6g0035 6 249566 252898 LSH