Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0037 ATGGACACACCAGAGAGGAATCAAATGAACGCTCCTCTTAATCCAAACCAGGATTCACCTCTATTCAACTTTATCAACAATTTATCTCCTATCAAACCTTCTAAGCATCTTCCATTCACTCACACTTTCAATTCACTCACATTTTCATCTCCTCCATCTCTCTTCACTTCACCACATGTCAACGAATCTAGATTCTTAAAGAGGCACATCTCTTTACACACACCAAAGACTAACGCTTCAGCTAAACATGTCGACAAAAAATATGCAAATGAAGAGGCTCTTCCGAATTCAACCGAATTACGGCAAAATACAAAACAAGGGATTCCCATAGCAGACGATGCAATCGAGTTACCGCAGTCCTTAAAGTATAACTGTGGTAGCCCTGGCTATGATTCAACGTTTTGCATTCATGCGGCTAACGGCCTCTTGGAGTTGCCTAAGGAGCCAGCACTGGATGTTACTTGTGTTCAGGAAGAAGGATGTAAAACAGATTCAGTTCAGAGCGAAAGTCCTCTTCGGGGAACCTGTCCAATTGACCCAAAGAGTGAATTTCCGGAATGTGGTTGGGATGGTTTAATTCCTGATCACACTGATCTGTTGATTTTTAATTCGCCAGATGAAGCCAGAGCTTTTAATAGCCTATTTCAGAAACCCTTGGACTCTTCGACAGATTTAATGTCTCTGTTACCACAATCTACGGTTGTCAATATTGGCCACAATGTGCAATTTATTGATTCAATCGCTCCTCGTTCTGAACTTGAAATTGAAAATCAGCATTCCCACCCAATAGCAGCCACAGAAACAGACCATGTTGTGGACAATGCTGCCATGAATAGCAATCCAAATGAGAAAACGGATGATGAGCTTGTTTCCGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTCGATTTTGAGATGGCCAGTGTGCGACGGAAGAACTCAGATTATAATTCAAATACAAGTTCCAGTACTTTACATTCTGATGGGAGGAATGTCGCTGATGATAACCAACTGGTTCATACAAAACACCACAGTGATTCACGGAAGTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCTACCTTAAAAGACCACAATGGCATAAAAACTGAAAGGTTGTCTTCTGGAAGACAACTCAGTCTGATTTGCTCCACTTCTTCATTGAAAATCTCTACAAGCCAAGAACATCATCATCTAGCCCTGGGTGATGTATCATCTGAAAGAGAAATAGATTTGTCAAACAATGGTGTTCAACCTGATGAAGATTGTCGTGAAGATCTCAATCAGAATAGCCCCAAAAAGAAAAGGCGTAAGTCGGACTCAGCTGGAGAAACCGAGGGCTGCAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGGGTCTACTGCATTGAACCATGCTCCTGTCAGGATTGCTTCAACCAGGCTATTCACGAAGATACTGTTCTTCAGACTCGCAAGCAGATTGAGTCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCCGAGTCTGTTCCTGAAGTTGGGGATGATCCAAATAAAACTCCAGCTTCAGCACGACATAAAAGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAGTATTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAAAATGCTTTTGGTAGGAAAGACGGCTCTGCTCTTATAGAAGCTGAACAAGAAGAAGAAACAGAGGCAGGGGAAAGGGGTGTGGCTGAAAAAGATTTACAGAAAACTGAAATTCAGAATATTGAAGATCATTCAGACTCTGCTCTTGTCTCATCACCATCACTGCGTTCCAGGTCATTGCTTCCATTGCCATTTTCATCCAAGGGAAAGCCACCTAGATCTTTTGTCACAACTATCTCCGGTTCTGCATTGTTTGCCAGCAGCAGCCAAAAGCTTGAGAAACCAAATTCTCTTTGGTCTCAATCTAAGCATTTTGAAACTGTTCTGGATGATGAACTCCTAGATATTCTCAGCATTGATAGCTCTCCTGTTGTTTGCGTCAAAACTTCTTCTCCGAATGGTAAGAGAATCTCTTCTCCTAAATGTGGCTTGGGACCGTCTTCGAGTCGCAGAGGTGGCCGAAAGTTGATCTTACAATCCATCCCTTCATTTCCTTCCCTCACCAATCAGCAGTAG 2226 0.4281 MDTPERNQMNAPLNPNQDSPLFNFINNLSPIKPSKHLPFTHTFNSLTFSSPPSLFTSPHVNESRFLKRHISLHTPKTNASAKHVDKKYANEEALPNSTELRQNTKQGIPIADDAIELPQSLKYNCGSPGYDSTFCIHAANGLLELPKEPALDVTCVQEEGCKTDSVQSESPLRGTCPIDPKSEFPECGWDGLIPDHTDLLIFNSPDEARAFNSLFQKPLDSSTDLMSLLPQSTVVNIGHNVQFIDSIAPRSELEIENQHSHPIAATETDHVVDNAAMNSNPNEKTDDELVSVMHRGLRRRCLDFEMASVRRKNSDYNSNTSSSTLHSDGRNVADDNQLVHTKHHSDSRKCILPGIGLHLNALATLKDHNGIKTERLSSGRQLSLICSTSSLKISTSQEHHHLALGDVSSEREIDLSNNGVQPDEDCREDLNQNSPKKKRRKSDSAGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNQAIHEDTVLQTRKQIESRNPLAFAPKVIRSSESVPEVGDDPNKTPASARHKRGCNCKKSSCLKKYCECFQGGVGCSISCRCEGCKNAFGRKDGSALIEAEQEEETEAGERGVAEKDLQKTEIQNIEDHSDSALVSSPSLRSRSLLPLPFSSKGKPPRSFVTTISGSALFASSSQKLEKPNSLWSQSKHFETVLDDELLDILSIDSSPVVCVKTSSPNGKRISSPKCGLGPSSSRRGGRKLILQSIPSFPSLTNQQ* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0037 741 MobiDBLite consensus disorder prediction 414 451 - -
Lan17g0037 741 ProSiteProfiles CRC domain profile. 450 575 IPR005172 -
Lan17g0037 741 MobiDBLite consensus disorder prediction 417 451 - -
Lan17g0037 741 MobiDBLite consensus disorder prediction 699 715 - -
Lan17g0037 741 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 538 573 IPR005172 -
Lan17g0037 741 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 452 487 IPR005172 -
Lan17g0037 741 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 740 - -
Lan17g0037 741 SMART CXC_2 535 576 IPR033467 -
Lan17g0037 741 SMART CXC_2 449 490 IPR033467 -
Lan17g0037 741 MobiDBLite consensus disorder prediction 699 722 - -
Lan17g0037 741 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 740 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0037 Lan-Chr17 190330 194472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0037 17 740 CPP Transcription Factor Family AT4G14770 44.754 1.16e-153 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan17g0037 TCR 6.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0037 - - gmx:100804447 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0037 17 190330 194472 Lan18g1167 18 16436237 16440835 LSH
Lan17g0037 17 190330 194472 Lan6g0033 6 237810 243115 LSH