Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0026 ATGTCTCAACCTATGTTATTGCCTTGTATTATTGCATTACTCTTATGTTCATGCCTTAATGCCTTAAATGCACACAATTCTTCCCTAGCCATACATTTAAACTCTACCATAATTGCTGGATCAAACTCTACTTGGAAATCTCCTTCAGGTCATTTTGAATTTGGATTCTATCCACTTTCCTCTACTCTCTTTCTTGTAGGAATATGGTTTGGAAAAATCAGAGAGAGAACACTTGTATGGTACCAAAGTCCTGCTTTGGAAACAAATTCCTTAATCCAACTCACCTTAGAAGGACACCTTGTGGTAACATATCCAAATGGAACTGTTGCTCATAACATACACAATGGAGACAGTGCAACTTCTGCATACATGCAAGATAATGCCAACTTTGTTATCAAAGACTCAAACTTAAGACTTGTGTGGGAGAGTTTTAGTTCTCCAACTAATACTATCTTACCAGGCCAAACCTTGAAACCTGGTCAAATTCTATATTCTAAGGGGAATAGACCTTCAAACTACTCAATAGGGAATTTTTTGTTGGAACCGCAAAATGATGGGAATTTGGTGCTCAGAGCATATCAATGGTCATCTCCTGCATATTGGTACGTTTCAACAATAGCATCCCAAGATGTGAGTTTGGTGTATAATGCTACTAGTGCTTTATTGTATCTTGTTAGTGGCACTACCAACATTTATCCTCTAACTAACAGCACTCCAACCCCAGTAGAGGACTACTATCACAGGGCAACAATAGATGAAAATGGAAATTTTCAGCAATTTACATATCATAAGAGAAATGGCACCAAGTGGACCAGGGTTTGGAGAGCCATAGATGATCCCTGCAGAGTTGAAGCTGTTTGTGGCGTGTTCGGCTTGTGCACTTCACCAGACAACAACCAAGTCAAGTGTGACTGCATTCCAGGTTATATCCCATTCGATCAACAAGACGTGTCTAAAGGGTGTCATCCAGAAACTGTAATTAACTATTGTGCAGGACCTTCTGTGATGAACTTCAAGCTTCAGGTGATTGATGACACTGATCTCCAATTTTATCCAGATTTTTCTAGGATAAACAATGTTGATTTGGAGGGTTGTAAGAAATCTGTAATGGATGATTGTAATATCATTGCTGCTACTTTTAATGCTTCAACTTCAACATGTGCCAAGAAGAGACTGCCACTTCTGAATGCAAGGAAAAGTTCATCTTCAAAGGGACAAAAGGCACTCGTTAAAGTTCCTAACAGTGTTGAATCTAGATCTAGAACATTAGAAGATTCTAAGAAAAAGCATTTTAATGTGAGACTTTTCTTGAAGGTTATGGTTGCAGTTAGTGCCACTCTTGCCTGCCTCTGTGGAGCCCTTGCCATTTACTATCATCCTTTTGGTCAAAGACTAATTAGAAGAAAAAGGACTCTGAATGCAAGTGGAATTGGAATCAACTTCAGGCAATTCACTTTCCAAGAGCTGCATGAAGCAACAAATGGATTCAGTAAGATTCTTGGAAAGGGATCTTCAGGCAAAGTCTACCATGGAACTTTAGTAATAGATAATGCAGAACTTGGTATTGCAGTGAAGAAGCTGGAAAAGAAAATTGAGAAAAGCGAAAGAGAATTCATGACTGAGCTCAAAATTATCGGTCGTACGCATCACAAAAATTTGGTGAGACTTTTAGGCTTTTGCCATGAGAATAACCATAGACTTCTTGTCTATGAGTTCATGCCAAATGGGGCATTGTCAAGTTTATTATTTGCACAAGGACAAAGACCTCCATGGAGTCAAAGAATTGATATGGCGCTTGGAATTGCGAGAGGCTTACTATACTTGCATGAAGAGTGTGAAAACCAGATCATACATTGTGACATCAAGCCACAAAATGTGTTACTTGATGCCAATCACATAGCAAAGATTGCAGATTTTGGACTCTCAAAGCTGTTGAATAAGGATGAAACTAAAACAAGCACAAACTTCAGAGGGACAATAGGGTATATAGCACCTGAATGGCTAAGAAGTGCACCAATAACTTCAAAGGTTGACATATTCAGCTTTGGGGTTATGTTACTAGAGATTACTTGCTGCAGAAGGCACATCGAGACGAGTCATGATGATGAAAAAGGAAGTGAAGATGAAGATTTAGTTCTATCAAATTGGGTTTTAAGGTGTATGGTGGCTAGGAAACTAGAGCTAGTGGTGGAGCATGACTCTGAAGCACTCAATGATTTCAAGAGGTTTGAAGAAATGGTATTGGTTGGGTTGTGGTGTGTTCATCCAGACCAAGCTCTTAGACCTTCAATGAAGCATGTCATGCAAATGCTAGAGGGAACTGTGGAAGTTGGGATTCCACCTTTGCTTTATAATCAGATGATAGAAAATCAGAGCTTATAG 2382 0.3908 MSQPMLLPCIIALLLCSCLNALNAHNSSLAIHLNSTIIAGSNSTWKSPSGHFEFGFYPLSSTLFLVGIWFGKIRERTLVWYQSPALETNSLIQLTLEGHLVVTYPNGTVAHNIHNGDSATSAYMQDNANFVIKDSNLRLVWESFSSPTNTILPGQTLKPGQILYSKGNRPSNYSIGNFLLEPQNDGNLVLRAYQWSSPAYWYVSTIASQDVSLVYNATSALLYLVSGTTNIYPLTNSTPTPVEDYYHRATIDENGNFQQFTYHKRNGTKWTRVWRAIDDPCRVEAVCGVFGLCTSPDNNQVKCDCIPGYIPFDQQDVSKGCHPETVINYCAGPSVMNFKLQVIDDTDLQFYPDFSRINNVDLEGCKKSVMDDCNIIAATFNASTSTCAKKRLPLLNARKSSSSKGQKALVKVPNSVESRSRTLEDSKKKHFNVRLFLKVMVAVSATLACLCGALAIYYHPFGQRLIRRKRTLNASGIGINFRQFTFQELHEATNGFSKILGKGSSGKVYHGTLVIDNAELGIAVKKLEKKIEKSEREFMTELKIIGRTHHKNLVRLLGFCHENNHRLLVYEFMPNGALSSLLFAQGQRPPWSQRIDMALGIARGLLYLHEECENQIIHCDIKPQNVLLDANHIAKIADFGLSKLLNKDETKTSTNFRGTIGYIAPEWLRSAPITSKVDIFSFGVMLLEITCCRRHIETSHDDEKGSEDEDLVLSNWVLRCMVARKLELVVEHDSEALNDFKRFEEMVLVGLWCVHPDQALRPSMKHVMQMLEGTVEVGIPPLLYNQMIENQSL* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0026 793 Pfam D-mannose binding lectin 82 157 IPR001480 -
Lan17g0026 793 ProSiteProfiles Protein kinase domain profile. 494 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0026 793 Gene3D - 147 288 - -
Lan17g0026 793 Gene3D - 30 146 IPR036426 -
Lan17g0026 793 ProSitePatterns Protein kinases ATP-binding region signature. 500 526 IPR017441 GO:0005524
Lan17g0026 793 SUPERFAMILY Protein kinase-like (PK-like) 481 780 IPR011009 -
Lan17g0026 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Lan17g0026 793 CDD STKc_IRAK 500 773 - -
Lan17g0026 793 SMART serkin_6 494 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0026 793 Pfam Protein kinase domain 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0026 793 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 783 - -
Lan17g0026 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 205 IPR036426 -
Lan17g0026 793 Pfam S-locus glycoprotein domain 244 311 IPR000858 GO:0048544
Lan17g0026 793 PIRSF SRK 1 792 IPR024171 GO:0004674
Lan17g0026 793 SMART blect_4 36 147 IPR001480 -
Lan17g0026 793 Coils Coil 517 544 - -
Lan17g0026 793 Gene3D Phosphorylase Kinase; domain 1 469 572 - -
Lan17g0026 793 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Lan17g0026 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 10 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0026 Lan-Chr17 147070 150279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0026 441 776 Receptor kinase-like Gene Family AT5G55830 36.857 2.48e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan17g0026 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0026 - - lang:109330973 1595.87