Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan17g0005 | ATGACATACTCACCAAATAGTATACTATCTAGAAATTTGAAGGTCCTCCTCTATTCTTTGATAACCAATTCCTCTCAACAAAATGGTGAGTATAGCACTATCATGGGTTTTGGAACCACTGATGCAGTCAACGGTCTCTTCCTTTGCCGCGGTGACATCAACACCACCTTATGCCAACACTGTGTCAACAACTCCTCAACACAGATCACTAAACACTGTCCCAACCAAACCGAGGCTGTCATATGGTACGATGAGTGCTTGTTACGTTACACAAACAAGTATTTTAAGTACTATAGTATCCAACCCAGAGTCAACTATCAACATGGCAACAAGATTTCTGACGTTGACTTCAATCAATCATTGTTTTTATTCTTGGATTCGTTGGCCACAAACGCTGCAAATTCAATGACAGCAAAGAAATTCGCAACAGGACAAGTGGAAGTGACGAGGTCTGTAACGGTGTATGGGTTGGCACAGTGCAGCAGCACAGACATGGCAAATTCCCAGTGTCAGATTTGTCTGAGAAATGCAATTGGAACTCTTCCGGCCGCCCAACAAGGCGGAGCTGCTATGCTTGCCTCGTGTGTTGTCAGATATGAACTCTTCCCATTTTACAACACGACTGGGACTGGGACTGGGACAGGGACACCATACTCAGGGGGAAAGAAAATTCAATCACTACTAGTTGTCATCATGGTTGTTCTGCCTATTGTTCTGGTAATTCTCCTATGTTCTGCCTGCTATTACGTACGGAAAAGATTGATGAAGAAACGAAGGACAATCCTAATAGAAAACTTTGGGGATGAAGTTACCGCAATGGAGTCATTGCAATTCAGTTTGGGTACAATTGAAGCTGCAACAAACAAGTTTTCAGTGGAGAATAAGATAGGCAGAGGAGGATTTGGAGTTGTGTACAAGGGTATTCTTTCAGACGGAAGACAAATAGCTGTAAAGAAACTTTCAACAAGTTCAGGACAAGGTTCTGCAGAATTTAAAAATGAGGTTTTATTAATAGCTAAACTTCAACATAGAAATCTGGTGACCTTAACAGGATTCTGCTTGGAAGAGCAAGAGAAAATCCTTATTTATGAATATGTTCCTAATAAGAGCCTTGATTACTTTCTATTTGAACCCCAAAAGCAAAGAGTGTTACAATGGTTTGAGCGTTATAAAATTATTGGAGGAATTGCACAAGGAATTCATTACCTACATGAGCATTCACGACTTAAAGTTATACACCGAGATCTCAAACCTAGCAATGTGCTGTTAGATGATAATATGAATCCAAAAATATCAGATTTTGGCATGGCAAGGATTGTTGCTATAGATCAAGAACGAGGAAATACTAACAGAATAGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGGCAATTTTCTGAGAAGTCGGATGTATTTAGCTTTGGAGTCATAGTTCTTGAGATAGTGAGTGCAAAAAGAAATGCTCGCCCTATTGAATCACACGATTATGATGACCTCCTAAGCATGGCTTGGAGAGAATGGAGGAATCAAACACCGTTAGAAATAATGGACTCGAGTCTAAGAGAGTCTTTTTCCGAAAGTGAAGTTATTAGGTGCATTCAAATTGGTTTATTATGTGTTAATGAAAATCCAGAAGATAGACCTACAATGTCTAAAGTTGTTTCATATCTGGGTAGCCTTTTAGTGGAATTGCCAATTCCTCAAGAAACTGGATATTGTATGAAGCAAAACATAACAACAGGGGAGTCCAGTTCAGGTCAATCTACCAATAATTCTACTGCCTTCTCAATCAATAACATCACTAACACTATTTCTTTTCCTCGATAG | 1839 | 0.3948 | MTYSPNSILSRNLKVLLYSLITNSSQQNGEYSTIMGFGTTDAVNGLFLCRGDINTTLCQHCVNNSSTQITKHCPNQTEAVIWYDECLLRYTNKYFKYYSIQPRVNYQHGNKISDVDFNQSLFLFLDSLATNAANSMTAKKFATGQVEVTRSVTVYGLAQCSSTDMANSQCQICLRNAIGTLPAAQQGGAAMLASCVVRYELFPFYNTTGTGTGTGTPYSGGKKIQSLLVVIMVVLPIVLVILLCSACYYVRKRLMKKRRTILIENFGDEVTAMESLQFSLGTIEAATNKFSVENKIGRGGFGVVYKGILSDGRQIAVKKLSTSSGQGSAEFKNEVLLIAKLQHRNLVTLTGFCLEEQEKILIYEYVPNKSLDYFLFEPQKQRVLQWFERYKIIGGIAQGIHYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARIVAIDQERGNTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARPIESHDYDDLLSMAWREWRNQTPLEIMDSSLRESFSESEVIRCIQIGLLCVNENPEDRPTMSKVVSYLGSLLVELPIPQETGYCMKQNITTGESSSGQSTNNSTAFSINNITNTISFPR* | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan17g0005 | 612 | ProSitePatterns | Protein kinases ATP-binding region signature. | 296 | 319 | IPR017441 | GO:0005524 | |
Lan17g0005 | 612 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 2 | 594 | - | - | |
Lan17g0005 | 612 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 578 | IPR011009 | - | |
Lan17g0005 | 612 | ProSiteProfiles | Gnk2-homologous domain profile. | 99 | 204 | IPR002902 | - | |
Lan17g0005 | 612 | Pfam | Salt stress response/antifungal | 114 | 200 | IPR002902 | - | |
Lan17g0005 | 612 | Pfam | Salt stress response/antifungal | 3 | 92 | IPR002902 | - | |
Lan17g0005 | 612 | CDD | STKc_IRAK | 296 | 564 | - | - | |
Lan17g0005 | 612 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 411 | 423 | IPR008271 | GO:0004672|GO:0006468 | |
Lan17g0005 | 612 | Gene3D | - | 103 | 204 | IPR038408 | - | |
Lan17g0005 | 612 | Gene3D | - | 1 | 95 | IPR038408 | - | |
Lan17g0005 | 612 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 2 | 594 | - | - | |
Lan17g0005 | 612 | ProSiteProfiles | Protein kinase domain profile. | 290 | 565 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0005 | 612 | SMART | serkin_6 | 290 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0005 | 612 | Pfam | Protein kinase domain | 291 | 559 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0005 | 612 | Gene3D | Transferase(Phosphotransferase) domain 1 | 366 | 570 | - | - | |
Lan17g0005 | 612 | ProSiteProfiles | Gnk2-homologous domain profile. | 1 | 95 | IPR002902 | - | |
Lan17g0005 | 612 | Gene3D | Phosphorylase Kinase; domain 1 | 251 | 365 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan17g0005 | Lan-Chr17 | 31116 | 34043 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan17g0005 | 2 | 612 | Receptor kinase-like Gene Family | AT4G05200 | 44.410 | 0.0 | 543 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Lan17g0005 | Pkinase | 2.5e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan17g0005 | - | - | cam:101500396 | 828.935 |