Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0005 ATGACATACTCACCAAATAGTATACTATCTAGAAATTTGAAGGTCCTCCTCTATTCTTTGATAACCAATTCCTCTCAACAAAATGGTGAGTATAGCACTATCATGGGTTTTGGAACCACTGATGCAGTCAACGGTCTCTTCCTTTGCCGCGGTGACATCAACACCACCTTATGCCAACACTGTGTCAACAACTCCTCAACACAGATCACTAAACACTGTCCCAACCAAACCGAGGCTGTCATATGGTACGATGAGTGCTTGTTACGTTACACAAACAAGTATTTTAAGTACTATAGTATCCAACCCAGAGTCAACTATCAACATGGCAACAAGATTTCTGACGTTGACTTCAATCAATCATTGTTTTTATTCTTGGATTCGTTGGCCACAAACGCTGCAAATTCAATGACAGCAAAGAAATTCGCAACAGGACAAGTGGAAGTGACGAGGTCTGTAACGGTGTATGGGTTGGCACAGTGCAGCAGCACAGACATGGCAAATTCCCAGTGTCAGATTTGTCTGAGAAATGCAATTGGAACTCTTCCGGCCGCCCAACAAGGCGGAGCTGCTATGCTTGCCTCGTGTGTTGTCAGATATGAACTCTTCCCATTTTACAACACGACTGGGACTGGGACTGGGACAGGGACACCATACTCAGGGGGAAAGAAAATTCAATCACTACTAGTTGTCATCATGGTTGTTCTGCCTATTGTTCTGGTAATTCTCCTATGTTCTGCCTGCTATTACGTACGGAAAAGATTGATGAAGAAACGAAGGACAATCCTAATAGAAAACTTTGGGGATGAAGTTACCGCAATGGAGTCATTGCAATTCAGTTTGGGTACAATTGAAGCTGCAACAAACAAGTTTTCAGTGGAGAATAAGATAGGCAGAGGAGGATTTGGAGTTGTGTACAAGGGTATTCTTTCAGACGGAAGACAAATAGCTGTAAAGAAACTTTCAACAAGTTCAGGACAAGGTTCTGCAGAATTTAAAAATGAGGTTTTATTAATAGCTAAACTTCAACATAGAAATCTGGTGACCTTAACAGGATTCTGCTTGGAAGAGCAAGAGAAAATCCTTATTTATGAATATGTTCCTAATAAGAGCCTTGATTACTTTCTATTTGAACCCCAAAAGCAAAGAGTGTTACAATGGTTTGAGCGTTATAAAATTATTGGAGGAATTGCACAAGGAATTCATTACCTACATGAGCATTCACGACTTAAAGTTATACACCGAGATCTCAAACCTAGCAATGTGCTGTTAGATGATAATATGAATCCAAAAATATCAGATTTTGGCATGGCAAGGATTGTTGCTATAGATCAAGAACGAGGAAATACTAACAGAATAGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGGCAATTTTCTGAGAAGTCGGATGTATTTAGCTTTGGAGTCATAGTTCTTGAGATAGTGAGTGCAAAAAGAAATGCTCGCCCTATTGAATCACACGATTATGATGACCTCCTAAGCATGGCTTGGAGAGAATGGAGGAATCAAACACCGTTAGAAATAATGGACTCGAGTCTAAGAGAGTCTTTTTCCGAAAGTGAAGTTATTAGGTGCATTCAAATTGGTTTATTATGTGTTAATGAAAATCCAGAAGATAGACCTACAATGTCTAAAGTTGTTTCATATCTGGGTAGCCTTTTAGTGGAATTGCCAATTCCTCAAGAAACTGGATATTGTATGAAGCAAAACATAACAACAGGGGAGTCCAGTTCAGGTCAATCTACCAATAATTCTACTGCCTTCTCAATCAATAACATCACTAACACTATTTCTTTTCCTCGATAG 1839 0.3948 MTYSPNSILSRNLKVLLYSLITNSSQQNGEYSTIMGFGTTDAVNGLFLCRGDINTTLCQHCVNNSSTQITKHCPNQTEAVIWYDECLLRYTNKYFKYYSIQPRVNYQHGNKISDVDFNQSLFLFLDSLATNAANSMTAKKFATGQVEVTRSVTVYGLAQCSSTDMANSQCQICLRNAIGTLPAAQQGGAAMLASCVVRYELFPFYNTTGTGTGTGTPYSGGKKIQSLLVVIMVVLPIVLVILLCSACYYVRKRLMKKRRTILIENFGDEVTAMESLQFSLGTIEAATNKFSVENKIGRGGFGVVYKGILSDGRQIAVKKLSTSSGQGSAEFKNEVLLIAKLQHRNLVTLTGFCLEEQEKILIYEYVPNKSLDYFLFEPQKQRVLQWFERYKIIGGIAQGIHYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARIVAIDQERGNTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARPIESHDYDDLLSMAWREWRNQTPLEIMDSSLRESFSESEVIRCIQIGLLCVNENPEDRPTMSKVVSYLGSLLVELPIPQETGYCMKQNITTGESSSGQSTNNSTAFSINNITNTISFPR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0005 612 ProSitePatterns Protein kinases ATP-binding region signature. 296 319 IPR017441 GO:0005524
Lan17g0005 612 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 594 - -
Lan17g0005 612 SUPERFAMILY Protein kinase-like (PK-like) 275 578 IPR011009 -
Lan17g0005 612 ProSiteProfiles Gnk2-homologous domain profile. 99 204 IPR002902 -
Lan17g0005 612 Pfam Salt stress response/antifungal 114 200 IPR002902 -
Lan17g0005 612 Pfam Salt stress response/antifungal 3 92 IPR002902 -
Lan17g0005 612 CDD STKc_IRAK 296 564 - -
Lan17g0005 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lan17g0005 612 Gene3D - 103 204 IPR038408 -
Lan17g0005 612 Gene3D - 1 95 IPR038408 -
Lan17g0005 612 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 594 - -
Lan17g0005 612 ProSiteProfiles Protein kinase domain profile. 290 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0005 612 SMART serkin_6 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0005 612 Pfam Protein kinase domain 291 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0005 612 Gene3D Transferase(Phosphotransferase) domain 1 366 570 - -
Lan17g0005 612 ProSiteProfiles Gnk2-homologous domain profile. 1 95 IPR002902 -
Lan17g0005 612 Gene3D Phosphorylase Kinase; domain 1 251 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0005 Lan-Chr17 31116 34043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0005 2 612 Receptor kinase-like Gene Family AT4G05200 44.410 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan17g0005 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0005 - - cam:101500396 828.935