Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1278 ATGAGAATTATGATAAAGGGCGGTGTTTGGAAAAACACTGAAGATGAAATATTGAAAGCGGCTGTTATGAAATATGGCAAAAATCAATGGGCTCGAATCTCTTCCCTTCTCGTTCGTAAATCTGCTAAACAATGTAAAGCTCGCTGGTACGAGTGGCTCGATCCTTCCATCAAAAAGACTGAGTGGACAAGAGAAGAGGATGAAAAACTGCTTCATCTTGCTAAACTTATGCCCACACAGTGGAGAACTATTGCTCCGATTGTCGGCCGTACACCATCCCAGTGCCTTGAGCGTTACGAGAAACTCCTTGATGCAGCCTGTGTTAAAGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGTCCAGGGGAGATTGATCCAAACCCTGAGTCGAAGCCTGCAAGACCGGATCCCGTTGACATGGACGAGGATGAGAAGGAGATGCTTTCGGAAGCACGAGCTCGGTTAGCCAACACGAAAGGAAAGAAGGCGAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGAAGGCTTGCTTCTTTGCAGAAAAAGAGAGAGCTGAAGGCTGCTGGAATTGATATCAGGCAGCGAAGGAGGAAAAGGAAAGGAATAGATTATAATGCGGAAATCCCATTTGAGAAGAGACCTCCTCCGGGGTTTTTTGACATTGCTGATGAGGATAGACCAGTTGAACAACCTAAGTTCCCTACTACAATTGAGGAACTTGAGGGAAAAAGAAGGATTGATGTTGAAGCACAATTAAGAAAGCAAGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCTATTTTGCATGCCAACAAGATGAATGACCCAGAAACGGTTAGAAAGAAATCAAAACTGATGCTTCCGCCACCCCAGATATCCGACCATGAATTGGATGAAATTGCAAAGTTGGGTTATGCAAGTGACCAAGCAGGGATTGAGGAACTCGGAGAAGGTAGTAGTGCTACACGTGCTCTTTTGGCTAATTATGCACAGACACCCGGCCAAGGAATGACTCCCTTACGAACCCCTCAGAGAACACCTGCTGGTAAAGGAGATGCTATCATGATGGAAGCCGAAAATCTGGCTCGGTTGAGGGAGTCCCAGACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAGAAAGGAAATTCAAACTCCGAACCCAGTGCTGACTCCCTCTGCAACTCCTGGAGGGACACCAAGCCTTACTCCTAGAAGTGGCATGACACCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAGGACATGGATATTCATGATAGCGCTAAGCTTGAGCTACGGAGACAAGCTGATCTGAGAAGAAGTTTGCGCTCTAGTTTAAGCAGCATTCCACATCCCAAAAATGAGTACCAGGTGGTGATGCAACCGGTTCCAGAAGATACTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAGTAGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCTGCAAGCACTACTTCGAAAACGATCAAAAGTCCTTCAAAGGGGACTTCCTAGGCCTCCTGCTGCGTCTTTGGAGCTTATTAAAAATTCATTGATGAGAGCTGATGAGGACAAGAGTTCCTTTGTCCCACCAACCTCAGTTGAGCAAGCTGATGAGCTGATAAGAAAGGAGCTTCTAACCTTACTGGAGCATGACAATGCTAAGTATCCGCTTGACGAGAATAAGGAGAAAAAGAAAGGAGCCAAGCGTTCAGCAACCGGGCCTGCTGTCCCTGTTATAGAAGATTTTGAGGAAGAGGATATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCCCAGTACCTTCGCGTGGCTATGGGGCATGAGAGTGAATCCCTTGATGAATTTCTTGAAGCACATATAACTTGCGTTAATGATCTTATGTACTTTGCCACCCGTAATGCCTATGGTCTATCCAGTGTTGCTGGAAACATGGAGAAGCTAGCGGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGTTGGACGATGGTAAGGAGAAGATAGTACGCATTGAGAAGAAGGTGATGGTACTCACGCAAGGCTATGAGACGAGGGCAAAGAAAAGTCTTTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGATGTAGCGGCAACAGAATTGGAGTGCTTCCAAGCTTTACAAAAGCAAGAGCAATTAGCAGCATCACACAGGATAAACAATGTATGGGGTGAAGTACAAAAGCAAAAAGAACTTGAGAAAACTCTACAAAAGAGATATGGAGATCATATAGCAGAGCTTGAAAGGGTACAAAATATCATGAACCACTACAGGGTACAAGCACAAGAAGAAATCGAAGCAAATAATCGCGAACTTGAGACTATTGAGAATACAGGTGATGAGACTAATGTTCAGGGTACTGAGAATGGAAGTGCTGTGTCAGTTGATCCATCTCACGATGGAACTATTGACCAACAAGTAGACAATGTGCAAGATCAAGCCACTTGTAGCTTAAAAAATGATGATATGGATGTGAATTCTTGTAAAGAGCAAACAGCACCCGCCACTGATCTTAAATTGACAGATACACCTATTATGGAAGATGACATTGCAAATGTGGTAGAAAGTAACAAAACCAGTGCTAATGTTGACGGAGAGACCACAGTAGATATGAGTGCTGCAGTTGAAGTAAGTAGTATTGAGGGAAATAAGGAGGATAGAGATGTTGAGAATCTAGATGATGGTGTGGAAGCTGTGAACCAAGGTGATAACTAA 2859 0.4449 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDIADEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAILHANKMNDPETVRKKSKLMLPPPQISDHELDEIAKLGYASDQAGIEELGEGSSATRALLANYAQTPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKEIQTPNPVLTPSATPGGTPSLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDIHDSAKLELRRQADLRRSLRSSLSSIPHPKNEYQVVMQPVPEDTEEPEEKIEEDMSDRVAREKAEEEARLQALLRKRSKVLQRGLPRPPAASLELIKNSLMRADEDKSSFVPPTSVEQADELIRKELLTLLEHDNAKYPLDENKEKKKGAKRSATGPAVPVIEDFEEEDMKDADQLIKEEAQYLRVAMGHESESLDEFLEAHITCVNDLMYFATRNAYGLSSVAGNMEKLAALQNEFENVRSKLDDGKEKIVRIEKKVMVLTQGYETRAKKSLWPQIEATFKQMDVAATELECFQALQKQEQLAASHRINNVWGEVQKQKELEKTLQKRYGDHIAELERVQNIMNHYRVQAQEEIEANNRELETIENTGDETNVQGTENGSAVSVDPSHDGTIDQQVDNVQDQATCSLKNDDMDVNSCKEQTAPATDLKLTDTPIMEDDIANVVESNKTSANVDGETTVDMSAAVEVSSIEGNKEDRDVENLDDGVEAVNQGDN* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1278 952 Coils Coil 688 715 - -
Lan16g1278 952 MobiDBLite consensus disorder prediction 497 522 - -
Lan16g1278 952 Gene3D - 5 59 - -
Lan16g1278 952 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Lan16g1278 952 Gene3D - 60 114 - -
Lan16g1278 952 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 850 - -
Lan16g1278 952 Coils Coil 167 187 - -
Lan16g1278 952 SMART sant 6 55 IPR001005 -
Lan16g1278 952 SMART sant 58 105 IPR001005 -
Lan16g1278 952 MobiDBLite consensus disorder prediction 113 150 - -
Lan16g1278 952 MobiDBLite consensus disorder prediction 925 952 - -
Lan16g1278 952 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Lan16g1278 952 CDD SANT 10 53 IPR001005 -
Lan16g1278 952 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Lan16g1278 952 CDD SANT_CDC5_II 55 106 - -
Lan16g1278 952 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Lan16g1278 952 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Lan16g1278 952 MobiDBLite consensus disorder prediction 826 851 - -
Lan16g1278 952 MobiDBLite consensus disorder prediction 380 447 - -
Lan16g1278 952 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Lan16g1278 952 MobiDBLite consensus disorder prediction 824 851 - -
Lan16g1278 952 MobiDBLite consensus disorder prediction 928 942 - -
Lan16g1278 952 Coils Coil 806 826 - -
Lan16g1278 952 PANTHER - 1 850 - -
Lan16g1278 952 Coils Coil 514 541 - -
Lan16g1278 952 MobiDBLite consensus disorder prediction 399 427 - -
Lan16g1278 952 Pfam Myb-like DNA-binding domain 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1278 Lan-Chr16 20718967 20723931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1278 1 840 MYB-Related Transcription Factor Family AT1G09770 74.292 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan16g1278 Myb_Cef 1.8e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1278 K12860 - gmx:100801352 1444.1