Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1274 ATGGAAAGATTATTGTTGTTGCTGGTGGTGCTGGTTTCTTCTATTGTGCTTTCTGTTTCTGCCATTGATGTTGAATTTGGACACTGTAACTGTGATGATGAAGGGATTTGGAGCATTCAGAGTATTCTTGTTTGTCAAAAAGTCAGTGACTTTTTCATTGCCATTGCTTATTTTTCCATACCAATTGAGCTACTTTACTTTGTTAGCTACTCCAATGTTCCATTCAAATTGGTCTTCCTTCAATTCATAGCCTTCATTGTTCTCTGTGGTTTGACTCATTTACTCAATGCTTATACATATTATGGCCCTCACTCCTTCCAATTATTGCTCTCTCTCACTGTTGCTAAGTTCCTCACTGCTCTTGTTTCATGTGCAACCGCAATTACCTTTCCTACTTTGATCCCTCTTCTCCTCAAATTCAAAGTGAGGGAGTTCTTCTTGAGGCAGAATGTGTTGGAATTAGGCCAAGAGGTTGGGATGATGATGAAACAAAAGGAAGCAAGTTGGCATGTACGGATGCTTACTCGTGAGATTAGAAAGTCCTTGGATAAGCATACAATATTGTATACTACTCTTGTTGAGCTTTCCAAGGCATTGGATTTGCATAATTGTGCAGTTTGGATGCCTGATGAGGACAGGCGCGAGATGCATTTGACTCACGAGTTGAAACCAAGCTTAGGAAATAAGCGTTGTGCTTCTATTCCGATAAACGACCGTGAAGTTTTAGAGGTAAGAAAGAGTAAAGGGGTTTGGATTTTGAGGCCTGATTCTGCATTAGGAGCTGCGAGTTGTGGTGGTGGAACTGAGGAGTCTGGTGATGTGGCAGCTATTCGCATGCCAATACTTCATGTCTCGAATTTCAAAGGAGGGACACCAGAGTTTGTTGAGACGTCTTATGCTATTCTGGTTCTGGTGCTTCCCAAATCGAAATTGAGGGTTTGGACCTCACATGAGATGGAGATAGTAGAAGTGGTTGCTGACCAGGTTGCAGTAGCCTTGTCCCATGCATCTGTTCTCGAAGAGTCTCAGCTAATGAGACAGAAACTTGCCGAGCAGAACCGAGTGTTGCAACATGCTCAAAAGAATGCGTTGATGGCGAGCCAGGCGAGGAGCTCATTTCAGAGAGTGATGAGTCAAGGAATGCGGAGACCTATGCATTCGATCCTCGGCTTGCTTTCAATGTTCAAAGAGGATAATATAAAATCTGAACAGAAGATTATCATTGACACGATGTTGAAAGTTAGCACTGCGCTCTCGAGTTTGATTAATGATGTGATGGAGATTTCGGAGAACGACAAAGGAAGTTTTCGGTTAGAGATGAAACCTTTCCATCTTCATTCCATGATGAGGGAAGCTTCTTGCATTGCCAAGTGTTTGTCTGGATATAAAGGCTTCGATCTTCAGATCGATGTGCTCAAGTCTTTGCCTGATTTGGTCTTAGGCGATGAGGCGAGGTCTTTTCAAGTGATTTTGCATATGATTGGATATTTGTTAAACATATATGACAGGGGGACTCTCATTTTTCGAGTTTTTCTTGAAAGTGGCAGTAGTGGAGATAATAAGGATGATAGAAATATTGGAATTTGGAGGTCAGGCATGCAAAATGATTATGTATATATAAAATTTAATTTTGAGATAACTGGTAATAGTTCTCAGTTAGATGAATCAATTTCAACAAGGCATCATGGTGGTAGGGGGCATAACAATAACGAGTCCAAGGAGGGATTGAGTTTCAGCATGTGCAAAACGCTTGTGCAGATGATGCAAGGAAATATCTGGATATCAACAAACTCTCTAGGTTTGGCACAAGGCATGACACTTCTTCTCAAGTTTCAGACAGGGCCATCACTCAGAAGATCCATTCCTGCACCTAAAGAATTTTCAAACATGCAATTTAGAAGTTTCAAGGTTGTGTTAGCTGATGATGATGGTGTAAACAGGACCGTGACCAAAAAGCTGCTTGAGAAACTTGGTTGTCAAGTAACTGCAGTTTCATCAGGGTTTGAGTGCCTTGGTGCTATAAGTGCCTCCGGTAACTCGTTCAAAATCATCGTGTTGGACCTTCACATGCCTGAAATGGATGGTTTTGAAGTCGCGAGAAGGATCCGGAAGTTCCACAGCCGTAATTGGCCTTTGATTATTGCTCTCACGGCTAGCGCGGAAAAACATGTTAAGGAGAAATGTCTACAAGTAGGAATGCAGGGATTGATTCGAAAGCCGATCCTCCTTCATGAGTTAGCCGATGAACTTAGAACAGTTCTGCAACGTGCTGGTGAAAATTTTGGAGAACAATTTTAA 2298 0.4182 MERLLLLLVVLVSSIVLSVSAIDVEFGHCNCDDEGIWSIQSILVCQKVSDFFIAIAYFSIPIELLYFVSYSNVPFKLVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLLLSLTVAKFLTALVSCATAITFPTLIPLLLKFKVREFFLRQNVLELGQEVGMMMKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPDEDRREMHLTHELKPSLGNKRCASIPINDREVLEVRKSKGVWILRPDSALGAASCGGGTEESGDVAAIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSKLRVWTSHEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRVLQHAQKNALMASQARSSFQRVMSQGMRRPMHSILGLLSMFKEDNIKSEQKIIIDTMLKVSTALSSLINDVMEISENDKGSFRLEMKPFHLHSMMREASCIAKCLSGYKGFDLQIDVLKSLPDLVLGDEARSFQVILHMIGYLLNIYDRGTLIFRVFLESGSSGDNKDDRNIGIWRSGMQNDYVYIKFNFEITGNSSQLDESISTRHHGGRGHNNNESKEGLSFSMCKTLVQMMQGNIWISTNSLGLAQGMTLLLKFQTGPSLRRSIPAPKEFSNMQFRSFKVVLADDDGVNRTVTKKLLEKLGCQVTAVSSGFECLGAISASGNSFKIIVLDLHMPEMDGFEVARRIRKFHSRNWPLIIALTASAEKHVKEKCLQVGMQGLIRKPILLHELADELRTVLQRAGENFGEQF* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1274 765 PIRSF Ethylen_sen_hybr_HK 2 760 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lan16g1274 765 PANTHER ETHYLENE RECEPTOR 5 754 - -
Lan16g1274 765 CDD REC_ETR-like 636 750 - -
Lan16g1274 765 Gene3D - 335 432 - -
Lan16g1274 765 CDD HATPase_ETR2_ERS2-EIN4-like 475 609 - -
Lan16g1274 765 SMART REC_2 635 750 IPR001789 GO:0000160
Lan16g1274 765 Gene3D - 433 614 IPR036890 -
Lan16g1274 765 MobiDBLite consensus disorder prediction 555 574 - -
Lan16g1274 765 CDD HisKA 367 429 IPR003661 GO:0000155|GO:0007165
Lan16g1274 765 Gene3D - 636 762 - -
Lan16g1274 765 PANTHER TWO-COMPONENT HISTIDINE KINASE 5 754 - -
Lan16g1274 765 Pfam GAF domain 185 333 IPR003018 GO:0005515
Lan16g1274 765 ProSiteProfiles Response regulatory domain profile. 636 754 IPR001789 GO:0000160
Lan16g1274 765 SMART HisKA_10 369 434 IPR003661 GO:0000155|GO:0007165
Lan16g1274 765 Coils Coil 342 362 - -
Lan16g1274 765 SMART gaf_1 183 343 IPR003018 GO:0005515
Lan16g1274 765 Pfam Response regulator receiver domain 637 750 IPR001789 GO:0000160
Lan16g1274 765 Gene3D - 163 334 IPR029016 -
Lan16g1274 765 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 438 597 IPR036890 -
Lan16g1274 765 ProSiteProfiles Histidine kinase domain profile. 376 615 IPR005467 -
Lan16g1274 765 SUPERFAMILY GAF domain-like 186 336 - -
Lan16g1274 765 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 355 434 IPR036097 GO:0000155|GO:0007165
Lan16g1274 765 SUPERFAMILY CheY-like 632 756 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1274 Lan-Chr16 20697364 20700540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1274 23 759 Miscellaneous Gene Families AT3G04580 62.517 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan16g1274 GAF 1.3e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1274 K14509 - gmx:100805023 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0600 19 11281516 11284986 Lan16g1274 16 20697364 20700540 LSH