Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1255 ATGGGAAACAGCGAGGAAGAGAAATCTACCAAGACTGAAAACCCTCCTTCACCTGTGACAATGGCCAACGGAACCAACCCGACCAATATTCATGTCTATCCTGATTGGGCAGCTATGCAGGCATATTATGGACCAAGAGTCGCTGTACCACCATACTACAACTCGGCAGTAGCTTCTGGTCACACTCCTCACCCATATATGTGGGGTCCACCACAGCCTATGATGCCACCATATGGTCCCCCATATGCAGCAATGTATCCACATGGAGGGGTTTATGCTCACCCCGGAGTTCCTATTGGGCCACCTCCACATGGTCAAGGAGTTCCATCTTCTCCTGCTGTTGGGACTCCTTTAAGCATAGAGAAATCACCGAAATCATCTGGAAATGCTGATCAGGGTTTAATGAAGAAACTGAAAGGGTTCGGTGGGCTTGCAATGTCTATAGGCAATGGCCATGCTGAGAGTGCGGAGCGTGGGTTGGAGAACATGCTGTCACAGAGTGGGGATACTGAGGGTTCCAGTGGTGGAAGTGACAGCAACACTTCAGGGGCTAATGAAACAAGAAGGAGAAAAGGCGGTGAGGGAACACCAACCACGGATGAAAACGGTAAAACTGAGATGCAAGTTAGTCCAGCATCCGAAGAGGCTACAGCTGCTAGTAAGATAATGTCGGTTGTGCCTGCTGGTGTTGCAGGAAAGTTAGCCGGACCTTCATTTTCTTTGGGTACGACCACCACACTGGAGTTGACCAACCCTTCCGGTGTTAGAGCAAATTCCACAAGTGCTCCACAACCTTGTGCAGTATTGCCTCCTGAAGCTTGGGTACAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCGAACCGAGAATCGGCTAGAAGGTCCAGACTAAGGAAGCAGGCCGAGTCAGAAGAACTGGCACTTAAAGTTGAGGCCTTGAATGCTGAGAATGTGACACTGAAATCAGAAATGAAAAAATTGGCTGAATGTTCCGAAAAACTGAGGGAAAAACTTAAACATGTTGAAGTTGGAGAAACAGAAGAGATAATGTTGAAGAGCAAGATTGTAAGTACAGAAAATTTGCTATCAACTATTGATAGAAGTGTAGATGAAGAGAATGGTTTTTGTGAAAAGAAACATAACAATTCTGGTGCAAAGCTGCATCAACTATTGAATTCAAGTCCTAGAGCTGATGCTGTTGTAGCTGGTTGA 1218 0.4655 MGNSEEEKSTKTENPPSPVTMANGTNPTNIHVYPDWAAMQAYYGPRVAVPPYYNSAVASGHTPHPYMWGPPQPMMPPYGPPYAAMYPHGGVYAHPGVPIGPPPHGQGVPSSPAVGTPLSIEKSPKSSGNADQGLMKKLKGFGGLAMSIGNGHAESAERGLENMLSQSGDTEGSSGGSDSNTSGANETRRRKGGEGTPTTDENGKTEMQVSPASEEATAASKIMSVVPAGVAGKLAGPSFSLGTTTTLELTNPSGVRANSTSAPQPCAVLPPEAWVQNERELKRERRKQSNRESARRSRLRKQAESEELALKVEALNAENVTLKSEMKKLAECSEKLREKLKHVEVGETEEIMLKSKIVSTENLLSTIDRSVDEENGFCEKKHNNSGAKLHQLLNSSPRADAVVAG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1255 405 MobiDBLite consensus disorder prediction 163 183 - -
Lan16g1255 405 MobiDBLite consensus disorder prediction 198 217 - -
Lan16g1255 405 MobiDBLite consensus disorder prediction 13 27 - -
Lan16g1255 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 405 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan16g1255 405 MobiDBLite consensus disorder prediction 163 218 - -
Lan16g1255 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Lan16g1255 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Lan16g1255 405 MobiDBLite consensus disorder prediction 97 134 - -
Lan16g1255 405 Pfam Disordered region downstream of MFMR 131 258 - -
Lan16g1255 405 PANTHER G-BOX-BINDING FACTOR 3 1 405 - -
Lan16g1255 405 SUPERFAMILY Leucine zipper domain 281 340 IPR046347 GO:0003700|GO:0006355
Lan16g1255 405 Gene3D - 281 337 - -
Lan16g1255 405 MobiDBLite consensus disorder prediction 278 303 - -
Lan16g1255 405 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Lan16g1255 405 Coils Coil 298 332 - -
Lan16g1255 405 MobiDBLite consensus disorder prediction 1 27 - -
Lan16g1255 405 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Lan16g1255 405 MobiDBLite consensus disorder prediction 112 130 - -
Lan16g1255 405 Pfam bZIP transcription factor 278 340 IPR004827 GO:0003700|GO:0006355
Lan16g1255 405 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1255 Lan-Chr16 20581524 20587166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1255 1 405 bZIP Transcription Factor Family AT2G46270 49.519 1.01e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan16g1255 MFMR_assoc 3.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1255 K09060 - gmx:778133 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1255 16 20581524 20587166 Lan11g0678 11 5705715 5711464 PCT
Lan16g1255 16 20581524 20587166 Lan9g0956 9 16083257 16089298 PCT
Lan11g0678 11 5705715 5711464 Lan16g1255 16 20581524 20587166 PCT
Lan9g0956 9 16083257 16089298 Lan16g1255 16 20581524 20587166 PCT