Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1236 ATGGGTAGTGAGAAGAGTTTAAAGGTTTTTCATTTGAATCGCCAAGTACATAACCAACATCACTATGGTAAAAAACAACAAGAGATTAGAGATGTTCCAAAAGGTTGTCTTGCAATTAAGGTAGGTCAAGGAGAAGAGAAACAAAGGTTTGTGGTTCCTGTTATATACTTCAATCACCCTCTCTTCATTCAACTACTAAAAGAGGCTGAAGAAGAATATGGTTTTGATCAAAAAGGAACCATAACAATCCCTTGTCAAGTAGAACAATTTAGGAATATTAGAGGCTTGATTGATAGGGAAATAACCCTTCACCATAATCATCATATTGGTTGCTTTGGTTTGTGA 345 0.3536 MGSEKSLKVFHLNRQVHNQHHYGKKQQEIRDVPKGCLAIKVGQGEEKQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTITIPCQVEQFRNIRGLIDREITLHHNHHIGCFGL* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1236 114 PANTHER SMALL AUXIN-UP RNA-RELATED 21 108 - -
Lan16g1236 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 108 IPR003676 GO:0009733
Lan16g1236 114 Pfam Auxin responsive protein 24 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1236 Lan-Chr16 20347424 20347768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1236 31 110 Calmodulin-binding Proteins AT5G20810 46.914 2.68e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1236 K14488 - pvy:116108881 179.104