Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1227 ATGAATGCTCCTACCTCCATTAATATTGTCCAAGGAGAAAAAAGAGTGAAACAATTATTCTGTTGTTTCTATAAATTAAATCCATATTTTTTTCTTCTATCCACAAAAAACGGAAACGAAAGTGATTCGGACGCAAATTCCAATGAGTCGCCGGAACATTACCAACCGATATCAGCTGTGGAAGACAACTACGACAACTCGGACGGAGAGCACCACGTCGAGTTCCACCAGCTTCCAAATGCAAAGAACGGGATCTCTTACCTGGATCTAAACGACAGCGTTAAGCAAAAGATCAGCGATGAAGAAGAGGAAGGAGAAGAAGATGAAGAGAGGATGAGAGAGACTTCGATTCGTAGGGCGTTCAGTGAGGAGGAGAATCAGAGGAGTGCACCGTTGACAGTGGAGAATGCCACGAGGGTGATGGAAGCAATGTGTGGAGTGTCGTTTGGTGGAGTGGCTCCCGATTGGGTTGCTGAGGTTCCGGAGGACTGTTGGATTGATCAGCTTCACAGATTGAGACAGACACCAAACACTTGA 537 0.4544 MNAPTSINIVQGEKRVKQLFCCFYKLNPYFFLLSTKNGNESDSDANSNESPEHYQPISAVEDNYDNSDGEHHVEFHQLPNAKNGISYLDLNDSVKQKISDEEEEGEEDEERMRETSIRRAFSEEENQRSAPLTVENATRVMEAMCGVSFGGVAPDWVAEVPEDCWIDQLHRLRQTPNT* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1227 178 PANTHER BNAA08G28800D PROTEIN 34 177 - -
Lan16g1227 178 Coils Coil 91 111 - -
Lan16g1227 178 Pfam Male enhanced antigen 1 (MEA1) 52 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1227 Lan-Chr16 20132730 20133744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1227 41 175 Chloroplast and Mitochondria Gene Families AT1G07020 46.575 8.31e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1227 - K15113 lang:109344979 190.66