Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1220 ATGGGTGGTACCTCACCTTGTGCTTCTTGCAAATTATTGAGACGTCGTTGCACCAAGGAGTGTATTTTTGCTCCTTATTTTCCTTCTGATGATCCCCAAAAGTTTGCCATTGTTCACAAGGTTTTTGGTGCTAGCAATATAAGCAAAATGCTGCAGGAGCTTCCAGTTCATCAAAGAGCAGATGCTGTAGGAAGTTTAGTTTATGAAGCAAATGCAAGAGTGAGAGACCCAGTGTATGGATGTGTTGGAGCCATATCTTTCTTGCAGAGCCAAGTTTCACAATTGCAAATGCAACTTGCAGTGGCACAGGCAGAGATTCTATGCATCCAGATGCAGCAAGAGCCTACAACTTTACCTACACAGTTTGACCAAGATGACAAATCATTGCTCCTATCTTACAACAACAGTAGTAACTATGAAATGCTTCCACAGTATCTCACCTCCTTTGCTTCATCTTCTTCCTCATCTTCCAATGTATTCCAAGAATCTAATCCTCTTAAAAGAGAGTCCTTTTGGACTTAA 522 0.4119 MGGTSPCASCKLLRRRCTKECIFAPYFPSDDPQKFAIVHKVFGASNISKMLQELPVHQRADAVGSLVYEANARVRDPVYGCVGAISFLQSQVSQLQMQLAVAQAEILCIQMQQEPTTLPTQFDQDDKSLLLSYNNSSNYEMLPQYLTSFASSSSSSSNVFQESNPLKRESFWT* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1220 173 Coils Coil 85 105 - -
Lan16g1220 173 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lan16g1220 173 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lan16g1220 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 170 - -
Lan16g1220 173 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1220 Lan-Chr16 19912848 19914248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1220 3 173 AS2 family AT2G30130 67.725 8.14e-81 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan16g1220 LOB 3.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1220 - - gmx:100819419 256.529