Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1209 ATGAGGCAAGGGTGTTATGGTCTTTTAAGGTTGCATACAATACTGAACTCAAATGCAGTCTCCAAAACCCTAGCAATAGCATACATACCTCATTGTGGTGGCTGCGCTTCGTTCCTTCCTTCCTCAACCCAACTCACGAACGCCATGGCATCAGAGAAGAAGTTAGCGAACCCAATGAGGGAGATCAAGGTTCAGAAGCTCGTCCTCAACATCTCCGTCGGCGAGAGCGGTGATCGTCTCACCAGAGCCGCCAAGGTCTTAGAACAATTGAGTGGCCAATCCCCTGTTTTCTCCAAGGCTCGATACACCGTGCGGTCATTCGGAATTAGGCGTAACGAAAAGATTGCTTGCTATGTCACTGTAAGGGGTGATAAGGCAATGCAGCTCCTTGAGAGTGGGTTGAAGGTCAAGGAGTATGAACTCTTGAGGAGAAACTTCAGTGATACTGGTTGTTTTGGATTTGGTATTCAGGAGCATATTGATCTCGGAATCAAGTATGATCCTTCAACCGGTATCTATGGGATGGATTTCTATGTAGTTCTAGAGCGCCCTGGATACCGTGTTGGTCGACGCAGAAGATGCAAAGCCCGGGTTGGAATTCAGCACAGGGTGACCAAAGATGATGCAATGAAGTGGTTCCAAGTTAAATATGAAGGAGTTATCCTCAACAAGTCCCAACAAATTTCTTAA 690 0.4667 MRQGCYGLLRLHTILNSNAVSKTLAIAYIPHCGGCASFLPSSTQLTNAMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQQIS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1209 229 Gene3D - 49 225 IPR022803 -
Lan16g1209 229 SUPERFAMILY RL5-like 57 221 IPR022803 -
Lan16g1209 229 PANTHER 60S RIBOSOMAL PROTEIN L11-1 36 228 - -
Lan16g1209 229 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 36 228 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lan16g1209 229 Pfam Ribosomal protein L5 57 110 IPR031310 -
Lan16g1209 229 ProSitePatterns Ribosomal protein L5 signature. 87 103 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lan16g1209 229 Pfam ribosomal L5P family C-terminus 114 212 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1209 Lan-Chr16 19753908 19755737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1209 49 229 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.580 7.96e-130 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1209 K02868 - han:110912325 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1209 16 19753908 19755737 Lan16g1209 16 19753908 19755737 ECH