Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1203 ATGGCGGATATTGTTTTGCAGAGAAACAACATCAGCCCCAACAACAGCACCAAAAAAGAAAGATCAAATCTATTACTTGGGCGTTTTGAAATTGGAAAACTCCTTGGTCATGGAACCTTTGCAAAAGTGTACTATGCAAAGAACATAAAAACTGGTGAAGGGGTAGCCATAAAGGTGATAGATAAAGAAAAAATCTTAAAGGGTGGTCTAGTGGCGCATATTAAGCGTGAAATCTCTATCCTGCGCCGTGTGCGCCACCCCAACATTGTTCAACTATTTGAGGTTATGGCCACAAAGGCAAAGATCTATTTTGTGATGGAATATGTTAGAGGGGGTGAACTTTTCAACAAGGTTGCAAAGGGAAGGTTGAAGGAAGAGGTTGCAAGGAAGTATTTTCAACAATTGGTCTCAGCTGTTGAATTTTGTCATGCTAGAGGTGTGTACCATAGGGATCTTAAGCCTGAAAATTTGTTGCTAGATGAGAATGGTAACCTTAAAGTTTCTGATTTTGGGCTTAGTGCTGTGTCTGATCAAATGAGGCAAGATGGGTTGTTCCACACTTTTTGTGGGACACCTGCCTATGTTGCCCCTGAGGTTTTGGGTAGGAAAGGGTATGATGGGGCTAAGGTTGATCTTTGGTCTTGTGGTGTTGTTTTGTTTGTGTTGATGGCAGGTTATTTACCATTCCATGATCAAAATGTTATGGCTATGTATAAGAAGATTTATAAGGGTGAATTTAGGTGTCCTAGGTGGTTTTCACCTGATCTATCTAGGCTCCTAACCCGGCTTCTCGATATCAAGCCTGAAACGCGGATTGTGATTCCAGAGATTATGGAGAATAGGTGGTTCAAGAAAGGGTTCAAGCAAATTAAGTTTTATGTTGAGGATGATAGGCTTTGTAATGTTGAGGATGGTCTCTTGGATAATGAGGATGATGCAGCATCCGTTGTTTCGGATTGTTCGATCTCGGAATCTGATTCTGAGATGGAGATTAGGAGAAGGAATGCTCCATTGCCAAGACCAGCAAGCTTGAATGCTTTTGACATTATATCATTTTCTAAGGGTTTTGATCTTTCAGGATTGTTTGAGGAGAAAGGGGACGAGACCAGGTTCGTGACTGCTGCACCAGTGTCCAAGATTATATCGAAATTGGAGGAGATTGCTCAATTGGTTAGCTTTAGTGTCAGGAAAAAAGAATGTCGGGTGAGCTTGGAGGGTACTAGAGAAGGTGTAAAAGGGCCACTGACTATTGCTGCTGAGATATTTGAATTGACACCTTCGTTGGTAGTGATTGAGGTGAAGAAAAAAGGAGGAGATAGAGCAGAGTATGAAAAGTTTTGTAACACCGAGTTGAAACCTGGGCTGGAGAATTTGATGGTGGGGGAATCTGCAACTTCTTCATTTTCGGCTGCATCTACTGAGCCACACCTTTTACGCGTGTTCTCTGAACCAATGCGTATGTCTTCAGATATTGAATCTCCACATTATACGCCTTCAGATATTGGATCTCCACGCTATACGGCTTCAGATATTGAATCTCCACACTATATGCCTTCAGATATCGAGTCTCCTCTCTATATGCCTTCAGATTCAGATACATGA 1602 0.4182 MADIVLQRNNISPNNSTKKERSNLLLGRFEIGKLLGHGTFAKVYYAKNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLVSAVEFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQMRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPDLSRLLTRLLDIKPETRIVIPEIMENRWFKKGFKQIKFYVEDDRLCNVEDGLLDNEDDAASVVSDCSISESDSEMEIRRRNAPLPRPASLNAFDIISFSKGFDLSGLFEEKGDETRFVTAAPVSKIISKLEEIAQLVSFSVRKKECRVSLEGTREGVKGPLTIAAEIFELTPSLVVIEVKKKGGDRAEYEKFCNTELKPGLENLMVGESATSSFSAASTEPHLLRVFSEPMRMSSDIESPHYTPSDIGSPRYTASDIESPHYMPSDIESPLYMPSDSDT* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1203 533 CDD STKc_SnRK3 28 282 - -
Lan16g1203 533 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1203 533 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Lan16g1203 533 ProSiteProfiles NAF domain profile. 339 363 IPR018451 GO:0007165
Lan16g1203 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lan16g1203 533 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 463 - -
Lan16g1203 533 Gene3D Transferase(Phosphotransferase) domain 1 19 335 - -
Lan16g1203 533 Pfam NAF domain 341 397 IPR004041 GO:0007165
Lan16g1203 533 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1203 533 CDD CIPK_C 345 455 - -
Lan16g1203 533 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1203 533 SUPERFAMILY Protein kinase-like (PK-like) 25 284 IPR011009 -
Lan16g1203 533 Gene3D Kinase associated domain 1, KA1 339 460 - -
Lan16g1203 533 MobiDBLite consensus disorder prediction 492 506 - -
Lan16g1203 533 MobiDBLite consensus disorder prediction 489 533 - -
Lan16g1203 533 PANTHER - 7 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1203 Lan-Chr16 19702656 19704783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1203 11 458 CBL-interacting serine-threonine protein kinases AT4G18700 80.176 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan16g1203 Pkinase 1.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1203 - - gmx:100790133 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1203 16 19702656 19704783 Lan16g1203 16 19702656 19704783 ECH
Lan4g0295 4 4968641 4970706 Lan16g1203 16 19702656 19704783 LSH