Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1200 ATGCACCTATTTCCCTTTCCTACCGTGTCCTCTTCTCCTTCTTCCATCTGTTCTTTGTTCCCTTCAACCCCTTCAACCTTAAAAACACTCTTTTTCACACACACTACTATCCTCACTTTCTTCTTCATTCTCAACACCATCATGAACAACCCAGTTGTCGAAAAGTTTTCTGAGTTTTATCATAAGTGGGTTTTGAAGCTTGAGGAAATCCTGCACCTTCTTCTAGAGGTTTCCAAGAAGAGAAGTAACGAGAATGGTGAACAAGAGATGTTAGTTTTGGTGTCAAAAGTTACATCTCATATAAAAGAATACTATACTGTGAAATGGGGTGCAGCTCATGAAGACGTTCTTGTTTTCTTCTCACCTGTTTGGTTGAGTCCATTGGAGAATGCATACCTTTGGGTCACTGGTTGGAAGCCTTCTACGGTTTTCAAATTGATGGAGTCTTTGAATAAAACGACAACGTTTAATATGACAGAGGAGCAGGTGAAGAAGATAGAGGTGCTGAGAATGAGGATCAGGATGGAGGAGGAGAAGGTGGAGAGTGAGATGGAGAGGCAGCAGGTGGCACTTGCTGATAGGAAGATGGTGGAGCTGGCAAGGATGTGTAGCAGAGAAAGGAATGGTGGCGGCGGCGGTGGTGGTGGTGGGGTGGTGGCAGAGAAGGTTGATATGGCTATGAAGGAAGTGTTGGCTGGGTTGGAGAAAATTATGAAGAGTTCAGATTGTGTTAGACTCAAAACACTTAAGGGTGTTTTGGATTTGCTTACACCAATGCAGTGTGTGTATTTCTTGGCTGCTAATATTGCTATGCAGCTTCGCCTCAGGCAATGGGAGAAGAAGAGAGATATGGCTGGATCCGAGTTAGACTCCTCTCTAGTACTAGAAAGGAGAGTTGTGTGA 903 0.4396 MHLFPFPTVSSSPSSICSLFPSTPSTLKTLFFTHTTILTFFFILNTIMNNPVVEKFSEFYHKWVLKLEEILHLLLEVSKKRSNENGEQEMLVLVSKVTSHIKEYYTVKWGAAHEDVLVFFSPVWLSPLENAYLWVTGWKPSTVFKLMESLNKTTTFNMTEEQVKKIEVLRMRIRMEEEKVESEMERQQVALADRKMVELARMCSRERNGGGGGGGGGVVAEKVDMAMKEVLAGLEKIMKSSDCVRLKTLKGVLDLLTPMQCVYFLAANIAMQLRLRQWEKKRDMAGSELDSSLVLERRVV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1200 300 PANTHER - 48 283 - -
Lan16g1200 300 Pfam Seed dormancy control 83 148 IPR025422 GO:0006351|GO:0043565
Lan16g1200 300 Coils Coil 166 186 - -
Lan16g1200 300 ProSiteProfiles DOG1 domain profile. 53 285 IPR025422 GO:0006351|GO:0043565
Lan16g1200 300 PANTHER PROTEIN DOG1-LIKE 4 48 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1200 Lan-Chr16 19659598 19660757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1200 56 276 bZIP Transcription Factor Family AT3G12250 28.507 7.36e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1200 - - gmx:100808459 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1200 16 19659598 19660757 Lan16g1200 16 19659598 19660757 ECH