Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1197 ATGCCGGAGTTCCCCGATTCCCTAACGCCTCCGGCCACCAACTCTCGCCCTTTCCCCGTCAGAGAGGACTGTTGGACAGAGGAAGCCTCCTCCACCCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGTGGCAACCTCCGCCAAAAGGATTGGCAAGATGTCGCTGACGCCGTTAATGCCCTACACGCTCACTCGAAGAAAACGCACCGCACGGATGTCCAGTGCAAGAACCGCATCGACACCATCAAGAAGAAATATAAGATCGAGAAAGCTAGGGTTGCGTCTTCGAACGGCGTCGTTTCGTCGTCTTGGCCTTTCTTCGAACGATTAGATGCTTTGATTGGCCCTAACTTCATTGCTAAAAAATCAACCTCTTCTGCATCGCCGTCTCCTCCGGTGGCTCTCCCTCTCTTGCCGTATCGTAAAACTCAATCCCCTGTGGCTGCACCGTTTACTGCTGTCGCGCTGCCACAGAAGCGGTCCGCGTCGGCAGTGATGGATGATGGTTACTTTAGGAGGAATTATTCGGCGATGGCGGCCGCTGCTGCTGCTGCTGAAGCTGATGAAGATGGTGATGAAGAAGATGATGATGAGGAAGATGAAGAGGAGGAGATGATGGAAGATGAAGGAAGAGGCAGTGAGGTGGAGGAAGGGGAGAGGGATAAGGGGAAAGAAGGAATGAGAAGGTTGGCAAAGGCGATAGAGAAGTTCGGGGAAGTATTTGAAAGAGTGGAAGGACAGAAACTAAGGCAGATGGTGGATTTAGAGAAACAGAGGATGCAATTCGCTAAAGATGTTGAAGTGCAGAGGATGCAGATGTTCATGGACACACAAGTTCAGTTGGAGAGGATTAAGCGCGGGAAGAGATCTGGTTCTGATGATATGTATAGCTAG 903 0.5216 MPEFPDSLTPPATNSRPFPVREDCWTEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKIEKARVASSNGVVSSSWPFFERLDALIGPNFIAKKSTSSASPSPPVALPLLPYRKTQSPVAAPFTAVALPQKRSASAVMDDGYFRRNYSAMAAAAAAAEADEDGDEEDDDEEDEEEEMMEDEGRGSEVEEGERDKGKEGMRRLAKAIEKFGEVFERVEGQKLRQMVDLEKQRMQFAKDVEVQRMQMFMDTQVQLERIKRGKRSGSDDMYS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1197 300 MobiDBLite consensus disorder prediction 189 215 - -
Lan16g1197 300 PANTHER OS05G0560600 PROTEIN 9 296 - -
Lan16g1197 300 Gene3D - 25 91 - -
Lan16g1197 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 296 IPR044823 -
Lan16g1197 300 MobiDBLite consensus disorder prediction 216 230 - -
Lan16g1197 300 MobiDBLite consensus disorder prediction 184 230 - -
Lan16g1197 300 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1197 Lan-Chr16 19577497 19583352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1197 21 295 Trihelix Transcription Factor Family AT3G14180 31.268 3.82e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan16g1197 Myb_DNA-bind_4 4.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1197 - - gmx:100815241 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1197 16 19577497 19583352 Lan16g1197 16 19577497 19583352 ECH
Lan4g0289 4 4905808 4907441 Lan16g1197 16 19577497 19583352 LSH