Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1188 ATGGATCAGATCACAACCCTTTGTGGGATTGAAGCTTGTGCTATAATATATAGCCCCAATGAGCTTCAGCCACAAGTTTGGCCACCCCATTTAGGGGTTCAAAGGGTGCTCAACAAGATCAAGAGAGTGCCTGAAACGGATCATGGCATGAAGATGTTAATTCAAGAGAGTTTGATCTTGAATCAAAGCATCATGAAGGCCCAAGAACAGCTGAAAAGTTTGAAGAATGAGAGTAGGAAGAAAAAGACGACCCTTCTCATGTATCAGTGCCTAAGTAGTGGGAACACTATTGTTAACAATGTTAACACGACTAATATGAATGATCTCTAA 330 0.4091 MDQITTLCGIEACAIIYSPNELQPQVWPPHLGVQRVLNKIKRVPETDHGMKMLIQESLILNQSIMKAQEQLKSLKNESRKKKTTLLMYQCLSSGNTIVNNVNTTNMNDL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1188 109 Gene3D - 1 59 IPR036879 GO:0003677|GO:0046983
Lan16g1188 109 Coils Coil 57 84 - -
Lan16g1188 109 PANTHER MADS BOX PROTEIN 1 98 - -
Lan16g1188 109 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 1 98 - -
Lan16g1188 109 SUPERFAMILY SRF-like 3 49 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1188 Lan-Chr16 19408886 19409215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1188 3 109 Type I MADS-box Gene Family AT5G48670 45.794 4.66e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1188 - - lang:109329408 191.045