Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1183 ATGCTTTATTTTCTTAGCAAAACCCTTTCTCCCAAACTAATTCTATCTCAAAACCACCCATTCTCATGGATTTCTTTGAGATTCATTTCAACAACGTCAAAATCAAAAGATCACTCTTTTACACTCTCATACCTCATTAACACTTGTGGTTTTTCACCTCAACGTGCTGCTACCATTTCTAACAACATCAATTTCAAAACTCGTGAAAAACCTGATTCAGTTATTGAGTTCTTAATGAACCATGGTTTCTCACAAACCAATGCATTAAGTGTTATTAGATCAGCCCCATCACTCCTTCAATCTTCTGATCCCAACAAATTCTTTTTGCCCAAAATTGAATTTTTTAAGTCTAAAGGTTTTTCTGATTCTGATATACTCACCCTTATAATCAAGTTCCCTACTATCCTTAAGAGAAGTTTGGAGAATGAAATTGTACCCTCTTTCGATTTCTTTAACGATATGTTTCGGTCTGAACACAAAATGATCAAGACTGTTATGCGCCATTCGGGTATTCTATATGGTCTTAATAGCTGCATTGCACCAAATATCAATCTCCTTAGGGAAGAAGGAGTTCCTGAATCTCATATTGTTCAATTTGTAGAATACTATCCTCGATCTTTGAAAGCGTCTCCTGAGAGGTTTAAGGAGACTGTGGAGGAAGTGAAGAAATTGGAGTTTAATCCTTTGAAGAAGCGATTTGTTGTAGCTATTCATGTAAAGAGATGCATAAGTGGATCCACTTGGGAAAGGAAGGAAGGTATCTATAGAAGGTGGGGTTGGACCGATGATGATTTTCAGGCAGCGTTTAGACTTCACCCATTCTGTATGTCAATGGCAGACAGTAAGATTGAGGCAGTCATGGAATTTCTGGTGAACAAATTGGGTTTTGAGTCAGCTGTTATTGCCCAGCATCCAGTACTGCTGACCTTGAGCTTGGAAAAGCGAATCATTCCGCGGGGTTCGGTTGTTCTAGCTTTGTTGTCAAAGGGTCTCGTGGAGAATCTAAACTTGAGTCCAATATTCAAGACGGTTGAAAAGGTATTTTTGGATAAGTTTGTCTATTGTCATGAGAAGAAGGAAGCTGATGAGCTATTGAAGTTGTATCAGGCTAAATTGGCTCTTGCAGGGTAA 1131 0.3846 MLYFLSKTLSPKLILSQNHPFSWISLRFISTTSKSKDHSFTLSYLINTCGFSPQRAATISNNINFKTREKPDSVIEFLMNHGFSQTNALSVIRSAPSLLQSSDPNKFFLPKIEFFKSKGFSDSDILTLIIKFPTILKRSLENEIVPSFDFFNDMFRSEHKMIKTVMRHSGILYGLNSCIAPNINLLREEGVPESHIVQFVEYYPRSLKASPERFKETVEEVKKLEFNPLKKRFVVAIHVKRCISGSTWERKEGIYRRWGWTDDDFQAAFRLHPFCMSMADSKIEAVMEFLVNKLGFESAVIAQHPVLLTLSLEKRIIPRGSVVLALLSKGLVENLNLSPIFKTVEKVFLDKFVYCHEKKEADELLKLYQAKLALAG* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1183 376 Pfam mTERF 75 238 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 Pfam mTERF 256 348 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 24 373 - -
Lan16g1183 376 PANTHER CGI-12 PROTEIN-RELATED 24 373 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 162 192 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 89 121 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Lan16g1183 376 Gene3D Transcription termination factor 3, mitochondrial 175 361 IPR038538 -
Lan16g1183 376 Gene3D Transcription termination factor 3, mitochondrial 37 174 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1183 Lan-Chr16 19303191 19305061 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan16g1183 mTERF 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1183 K15032 - twl:120012851 332.798