Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1167 ATGGATGGTAACAAGGACGAAGCATTGAGGTGTTTTCGTATCGCGGAGGAAGCAATCGCAATCGGTAACAAAGATCGCGCCCTCAAATTCATCAAAATCGCACAACGTCTCAATCACAATTTACCCCTTGATTCCTTACTAAACCAATGCCACCGCCTCGATTCTCAATCCTCCTCCGTCACAAATCGCGCCACCGCAACCACCAGCGCCGCGAAGGCCGGAGCAGCGGATAACGAGGGTTTAAACGGTGAGAGAAATTACAGTGATGAAAATGTTCAATTGATTAGGGAAATTAAGGGGAGATCAGATTATTATGCTATTCTAGGTGTTGAGAAAAGTAGTTCTGTTGAAGAGATTAGAAAAGCTTATAGGAAAATCTCATTGAAGGTTCATCCTGATAAAAACAAAGCTCCGGGTTCCGAAGACGCGTTTAAGAAAGTCTCTAAGGCTTTCAAGTGTTTAAGTGATGATATTTCAAGGAGGCAATATGATCAAACAGGATTAGTTGATGAGTTTGAGTACAGTCAACAATGTAACACTAATGTTAGGCACCGGAGGCGAAGAACTACCACTGCTCGTGATTTTTTCGAGGATGAGTTCGATCCTGATGAGATATTTAGGGCATTCTTTGGACAATCTAATGTGTTCGATAGAACTCGTGTTTATAGAACGCGAGCAACAACAAGTAATCACAATAGGCAAGAATCTCAGGGTGGTTCGGGGCTTAAAATAATGCTGCTTATTCAGCTGTTGCCATTCTTAATTGTTTTGTTGCTTGCTTACTTGCCCTTTTTGGAATCTGATTATTCCTTGCACGAGAATTATCCGTACCAGATTCTGAAGACGACAGAGGTGTACGGGGTTCAGTATTTCGTGAAATCTCAAGGTTTTGATTCTAATTATCCGTCTGGAAGCCCTGCTCGCGCTAAAATTGAGGACAATGTCATAAAGGATTATAGCAATATGCTTCATCATTATTGTCAAACAGAGATGCAGAGGCGTACTTGGAATAGGAACCTGCCAACTCCTCATTGTGAAAAGCTAAAAAGCTTCCGAGTTGCCTCTGCCTGA 1071 0.422 MDGNKDEALRCFRIAEEAIAIGNKDRALKFIKIAQRLNHNLPLDSLLNQCHRLDSQSSSVTNRATATTSAAKAGAADNEGLNGERNYSDENVQLIREIKGRSDYYAILGVEKSSSVEEIRKAYRKISLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDISRRQYDQTGLVDEFEYSQQCNTNVRHRRRRTTTARDFFEDEFDPDEIFRAFFGQSNVFDRTRVYRTRATTSNHNRQESQGGSGLKIMLLIQLLPFLIVLLLAYLPFLESDYSLHENYPYQILKTTEVYGVQYFVKSQGFDSNYPSGSPARAKIEDNVIKDYSNMLHHYCQTEMQRRTWNRNLPTPHCEKLKSFRVASA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1167 356 Pfam DnaJ domain 103 164 IPR001623 -
Lan16g1167 356 Pfam Domain of unknown function (DUF1977) 267 335 IPR015399 -
Lan16g1167 356 PANTHER CHAPERONE PROTEIN DNAJ 49 1 353 - -
Lan16g1167 356 MobiDBLite consensus disorder prediction 58 85 - -
Lan16g1167 356 Gene3D DnaJ domain 100 222 IPR036869 -
Lan16g1167 356 PANTHER AT29763P-RELATED 1 353 - -
Lan16g1167 356 SUPERFAMILY Chaperone J-domain 100 211 IPR036869 -
Lan16g1167 356 SMART dnaj_3 102 159 IPR001623 -
Lan16g1167 356 PRINTS DnaJ domain signature 105 123 IPR001623 -
Lan16g1167 356 PRINTS DnaJ domain signature 123 138 IPR001623 -
Lan16g1167 356 PRINTS DnaJ domain signature 139 159 IPR001623 -
Lan16g1167 356 CDD DnaJ 103 156 IPR001623 -
Lan16g1167 356 MobiDBLite consensus disorder prediction 58 72 - -
Lan16g1167 356 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1167 Lan-Chr16 19007232 19008922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1167 95 253 Miscellaneous Gene Families AT1G79030 27.160 2.26e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1167 K09518 - gmx:100820432 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0077 4 987524 991899 Lan16g1167 16 19007232 19008922 LSH