Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1153 ATGGCATATCAAATGGCATCACTGAAACTTGAGATGAATGAAGTAGTGCATGTCAAACCTTCTAAACCAACACCTTCCATTGTTCTTCCTCTATCTACCCTTGACCATAGACCCTATCCTGATAGCATTTGGCCTATAGTTCATGTTTACCGGTCAGCCTCAAATGGGAAGCTAGATCCTGCTTTTGTGCTCAAACAAGCCCTTTCAAAGGCTTTGGTTTATTATTACCCTCTTGCAGGTAAGCTAGTAAAACAACCCGACGGAAAAGTTGCTATCAATTGCAACAATGATGGAGTTCCATTCCTGGAAGCAATTGCAAATTGTAATCTTTCCTCTCTTAATTATCTAGATGATCATGACATCCTAATTGCAAAACAATTGGTTTTCGATTTACATCTTCAAGATGAAAATGAATACCCACATCCAGTTTCGTTCAAGTTGACCAAATTCCAATGTGGAGGTTTCACAATTGGAATGAGCACATCACATATTGTGTGTGATGGTTGGGGAGCATGTCAGTTCTTCCGAGCCATTGTTGAACTGGCAAGTGGTAAAAGTGAGCCCTTTGTGAAACCTGTTTGGGAGAGAGAAAGATTAATAGGATCAATCACTACACAACCAATGCCAAATCCAATGGATGAGGCTACTGCTGCAGTTTCACCATTTCTTCCAGCCACTGATGTTATGTATGAGTTGTTTAAGGTTGACAAGGAAAGCATAAGAAGACTCAAGATGAGTTTAATGAAGGAAATTAGTGGCAATGAAACAATGGAACAAGGCTTCACAAGTTTTGAATCTCTTGCTGCATATGTGTGGAGATCAAGAGCAAGGGCCTTAAACCTAAATAATGAAGGGAAAACTTTGCTTGTTTTCTCAGTGCAGGTGAGACAACACATGAGTCCTCCTTTGTCTGATGGGTACTATGGAACTGCTATCACAGAAGGGCAAGTTGTGCTAACCATGAAGGAGCTCAATGAGAAACCACTCTCAGATATAGTGAAGCTTGTCAAAGAGAGTAAAAATATTGCTTTCACTGGTGATTTTATCAAAAACACAATTGATACATTGGAGTCTAATCCAGAGAATTTTAATGTTGAAGAAGGTCCTGGTGCAACATTGGCTTTATCAGATTGGAAGCATTTGGGTTTCATGCCAAATGTGGATTTTGGATGGAAGGAACCAATAAATATGGTACCTGCTCCATGCAACATGTTTGAGTATGAGGGTTTGTGCATTTTCTTGTCTCCTAGTAAGTATGACCCATCAATGGAAGGAGGAGTTAGGGTTTTCATATCACTCCCTAGTGTTGCCATGCCTAAGTTTAGAGAGGAGATGGAAGCTCTGAAGGTTACTACACCCTAG 1362 0.4023 MAYQMASLKLEMNEVVHVKPSKPTPSIVLPLSTLDHRPYPDSIWPIVHVYRSASNGKLDPAFVLKQALSKALVYYYPLAGKLVKQPDGKVAINCNNDGVPFLEAIANCNLSSLNYLDDHDILIAKQLVFDLHLQDENEYPHPVSFKLTKFQCGGFTIGMSTSHIVCDGWGACQFFRAIVELASGKSEPFVKPVWERERLIGSITTQPMPNPMDEATAAVSPFLPATDVMYELFKVDKESIRRLKMSLMKEISGNETMEQGFTSFESLAAYVWRSRARALNLNNEGKTLLVFSVQVRQHMSPPLSDGYYGTAITEGQVVLTMKELNEKPLSDIVKLVKESKNIAFTGDFIKNTIDTLESNPENFNVEEGPGATLALSDWKHLGFMPNVDFGWKEPINMVPAPCNMFEYEGLCIFLSPSKYDPSMEGGVRVFISLPSVAMPKFREEMEALKVTTP* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1153 453 Pfam Transferase family 9 447 - -
Lan16g1153 453 PANTHER ACYL TRANSFERASE 4 5 449 - -
Lan16g1153 453 Gene3D - 220 445 IPR023213 -
Lan16g1153 453 Gene3D - 4 209 IPR023213 -
Lan16g1153 453 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1153 Lan-Chr16 18717081 18720909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1153 8 443 Monolignol Biosynthesis Gene Families AT5G48930 27.815 7.80e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1153 K20240 - gmx:100783730 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0892 19 16351780 16353872 Lan16g1153 16 18717081 18720909 LSH