Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1151 ATGGAGACTGAAGCTGACTTGGGAAATGGCTCTATTGTTCTAATCAAGCAAGGGGCTGAAGCTAGGGTTTTTGAATCATCTTTTGCGGGGAGGAGGTCTGTTATCAAGGAACGCTTCTCAAAGAAATACCGGCATCCAACGTTGGATTCTAAACTGACACTCAAGCGCTTGAATGCGGAGGCCAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTCATACTCCAGTGCTTTATGCCGTGGATCCTGTGTTGCACACTTTAACATTTGAATATGTTGAGGGCTCTTCAGTGAAAGATGTATTTCTTGAATTTGGGTCCCGCGATGATGTTGAGGAGCAGCTGGATAATATTGCTTATCAAATTGGTGAGGCAATTGGAAAGTTACATGATGGTGGTCTTGTTCATGGTGATTTAACGACATCAAATATGTTACTAAGGAATGATACCAATCAGTTGGTCCTGATTGACTTTGGTTTGAGCTTTACTTCAACTCTACCTGAGGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTCTTCTTTCAATGCATTCTTCTTGTGGGAATGTGATGGATCGGATACTTGCTGCATACCGCAAGTCATCAAAACAGTGGTCATCCACATGGAACAAGCTGGGCCAAGTGCGACAAAGAGGGCGAAAGAGGACCATGGTTGGATGA 681 0.4405 METEADLGNGSIVLIKQGAEARVFESSFAGRRSVIKERFSKKYRHPTLDSKLTLKRLNAEARCMTKARRLGVHTPVLYAVDPVLHTLTFEYVEGSSVKDVFLEFGSRDDVEEQLDNIAYQIGEAIGKLHDGGLVHGDLTTSNMLLRNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTWNKLGQVRQRGRKRTMVG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1151 226 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1151 226 Pfam Protein kinase domain 41 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1151 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Lan16g1151 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Lan16g1151 226 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1151 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 14 220 IPR022495 GO:0004674
Lan16g1151 226 SUPERFAMILY Protein kinase-like (PK-like) 14 174 IPR011009 -
Lan16g1151 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Lan16g1151 226 Gene3D Transferase(Phosphotransferase) domain 1 105 223 - -
Lan16g1151 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1151 14 160 MAP Kinase Kinase Kinase AT5G66710 27.815 2.00e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan16g1151 Pkinase 8.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1151 K08851 - jre:109018511 391.734