Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1150 ATGGCTAATCAGAAAACTCTCTTCTCCCTTCATATGAAGGATGTTGTGATTGTTAAACCCTCCAAACCCACACCTTCTGTTACTCTTTCTCTGTCCACCTTTGACAATAACCCTGGTCTGAACATTCTATGCCACACCATTTATGTATACAAAGCAAATCTTGATTACCCAAATGGCCAACATCAACTAGACCCTGCGCATGTGATAAAAGAAGCACTCTCAAAGGCTTTGGTTTACTATTATCCTCTTGCAGGGAAGTTAATAACACATGATGATGGAAAACTTAGAATCAACTGCAATGGTGATGGAGTACCATTCTTGGAGGCAAGTGCTAATTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGAGTCATGTTCCAACTTCACAGAAGTTGTTCTTTGATAATCCTTCTCAAGATGAAACTAGTGAACATGCCTTGGTTTTCAAGGTGACCAAGTTTCTCTGTGGGGGCTTCACATTTGGTTTGGGATTGTCACATGCTGTTTGTGATGGATTTGGTGCTGCCCAATTCTTCCGAGCCCTGGCTGAACTCGCCAGCGGAAAATGCGAGCCAAGTGTGAAACCTGTGTGGGAAAGGGAGAAACTAGTAGGGACAATCCTTAAGGAACCACTCAAACTTCCCATGGATGAAACTTTGAAGGCAGTTTCACCATTTTGGCCAACTACAGAGATTTCACATGAATGCTTTAACTTGAATGGTCAGATAATTCAAAGACTCAAAATGAGGCTGATGAAGGAAGGTGATAAGAGTGTGAAGGATAGCTTCACAACTCTTGAAACACTTGGTGCTTATGTATGGAGATCAAAAGCTAGAGCTTCGGAATTGAGTTCTGAGGGGCAAACATTGTTCTCTGTAGCAGTTGGAGTGAGAAGCCTATTGGATCAACCATTGCCTGAAGGGTACTATGGGAATGCTTTTGTGGCTGCAAATGTAGTTCTAACAGTGAAGGAACTGAATGAAAGACCACTCTCATATGTTGCAAAACTCATTACAGAGAGCAAAAAACTTGCTTTTAAGAATGAATATATCAGACACTCAATTAATATGTTGGAGACAATGAGGAAATATAACATTAGGATTGAAAGTACAGGTGCATCACTGATATTAACAGATTGGAGGCAATTGGGTTTATTGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTACCAGTCCCATGGAACATGTTTGGATACGTTGATTTGTGTATTTTTTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTATTTGTAACCCTTCCCAAAGCATCCATGCCCAAGTTCAGGGAAGAGATGGAGGCCCTCAAGGTTATGAAAGATTGGGATTGCTACGGATTTTTACTGCATTATGCTAATTATTGCTGTTACTTTTAA 1419 0.4066 MANQKTLFSLHMKDVVIVKPSKPTPSVTLSLSTFDNNPGLNILCHTIYVYKANLDYPNGQHQLDPAHVIKEALSKALVYYYPLAGKLITHDDGKLRINCNGDGVPFLEASANCELSSLHYLEGSHVPTSQKLFFDNPSQDETSEHALVFKVTKFLCGGFTFGLGLSHAVCDGFGAAQFFRALAELASGKCEPSVKPVWEREKLVGTILKEPLKLPMDETLKAVSPFWPTTEISHECFNLNGQIIQRLKMRLMKEGDKSVKDSFTTLETLGAYVWRSKARASELSSEGQTLFSVAVGVRSLLDQPLPEGYYGNAFVAANVVLTVKELNERPLSYVAKLITESKKLAFKNEYIRHSINMLETMRKYNIRIESTGASLILTDWRQLGLLEEVDFGWKASVNIVPVPWNMFGYVDLCIFLPPSNLDPSMKGGVRVFVTLPKASMPKFREEMEALKVMKDWDCYGFLLHYANYCCYF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1150 472 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 451 - -
Lan16g1150 472 Gene3D - 7 210 IPR023213 -
Lan16g1150 472 Gene3D - 228 447 IPR023213 -
Lan16g1150 472 Pfam Transferase family 14 449 - -
Lan16g1150 472 PANTHER ACYL TRANSFERASE 4 6 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1150 Lan-Chr16 18680490 18682182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1150 10 445 Monolignol Biosynthesis Gene Families AT5G48930 27.729 5.40e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1150 K20240 - gmx:100801843 710.679