Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1138 ATGGCCACTTCATTAGAATCCAATGGAAAACTCTTGAACAAGAACCTTAAAGTAGAACAAAAACATACCCAAATGAAACAAGAAAACACTACTTTTGACACTGCCATGCAATGGACAAGTTCATTTGTTCTTCCAATGGTTTTAAGATCAGCAAATGGACTTGGAATCTTTGAGATCTTAGCAAAATCTGGTGAAAATTCTAAGCTTTCTGCAAAGGATATTGCAACACAAATTGGAACCAATAATCCAGAAGCACCAACTATGTTGGATAGAATTTTAAGGTTGTTGGTTAGTTATTCTGTGTTGAATTGTTCTATTGTTGAAGATACAAAAGAACATGTTGGGTTGCAACAGAATCTGTATAGTCTCACTCCTGAGTCTAAATATTTTGTGAAGGATAGTAATGGTTTATCATTGGGTTCTGTATTGGCTTTAATTCTTGATAATGTCTTCTACCAAAGCTGGGCTGAACTAGAAGGAGCAATTCTAGAAGGTGGTGTACCTTTTAATAGGGTTCATGGTATGCATGCATTTGAATACCCAAGTGTGGATCCTAGGTTCAATGAAGTTTTCAATAAAGCTATGATAAGCATCACCACTATAGCTATGAAGAGTATTCTTGAAGTCTACAAAGGTTTTGAGGACATTAATAAACTTGTGGATGTTGGTGGTGGACTTGGGATTAATCTCAAATTGATCACTTCTAAGTACCCTAATGTTAAGGGTATTAATTTTGATTTGCCTCATGTCATACAACATGCCCCTCCTTATGATGGGGTGGAGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCCATTGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTGAAGCTATTAAAGAATTGTTACAAAGCTATTCCTAATGATGGAAAAGTTATTGTAGTGGATTCAATTCTTCCCATTGTTCCTAATACAACATCTTATGCCAAAAATGCTTTTGTTTCTGACCTTTTAATGTTGACTCAAAATCCAGGAGGTAAAGAGAGAACTCAAAAAGAAATCATGGAATTGGCCACAAAATCTGGATTTAATTGTATCAAATTAATGTGTTGTGTTAATGGGTTATGGGTTATGGAGTTTTTTAAGTAA 1137 0.3536 MATSLESNGKLLNKNLKVEQKHTQMKQENTTFDTAMQWTSSFVLPMVLRSANGLGIFEILAKSGENSKLSAKDIATQIGTNNPEAPTMLDRILRLLVSYSVLNCSIVEDTKEHVGLQQNLYSLTPESKYFVKDSNGLSLGSVLALILDNVFYQSWAELEGAILEGGVPFNRVHGMHAFEYPSVDPRFNEVFNKAMISITTIAMKSILEVYKGFEDINKLVDVGGGLGINLKLITSKYPNVKGINFDLPHVIQHAPPYDGVEHVGGDMFESVPIGDAIFMKWILHDWSDEHCLKLLKNCYKAIPNDGKVIVVDSILPIVPNTTSYAKNAFVSDLLMLTQNPGGKERTQKEIMELATKSGFNCIKLMCCVNGLWVMEFFK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1138 378 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Lan16g1138 378 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 15 378 - -
Lan16g1138 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 376 IPR029063 -
Lan16g1138 378 PIRSF O-mtase 12 378 IPR016461 GO:0008168
Lan16g1138 378 Gene3D - 13 130 IPR036388 -
Lan16g1138 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 378 IPR016461 GO:0008168
Lan16g1138 378 Pfam O-methyltransferase domain 155 360 IPR001077 GO:0008171
Lan16g1138 378 Gene3D Vaccinia Virus protein VP39 131 378 IPR029063 -
Lan16g1138 378 PANTHER O-METHYLTRANSFERASE 15 378 IPR016461 GO:0008168
Lan16g1138 378 SUPERFAMILY "Winged helix" DNA-binding domain 29 133 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1138 Lan-Chr16 18452852 18456207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1138 35 378 Monolignol Biosynthesis Gene Families AT5G54160 55.523 6.73e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1138 K13066 - gmx:100789402 493.041