Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1136 ATGGATGCGTACTCCTCGGGAGAAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGGGAACGATGGACAGATGAGGAGCATAATAGGTTTTTGGAAGCCTTGAAGCTATATGGGCGAGCATGGCAGCGCATTGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCTCTCTTAAAGGGTATTTCAATCGGACATGCTCTTGACATCGAAATTCCCCCTCCACGGCCTAAAAGAAAACCAAGCAATCCTTATCCCCGTAAGACCAATGTTGGTTCCCCAACAATAAATAGTCGATCAGATCAAGGCACAGTTGCATCTTCGCATAGTAAAGAAGCACTGGACTTGGAGAAAGAACCACTTCCAGAGAATGATGAAGATGAAAGACCAACAACTGTAAAAGAAAATAAGGATGACAACTGCTCGAAAGTTTTTGCTGTTATCCAGCAGGCACCCTGTTCATCTGTATCTTCAGCAATATCAGCGTCAGTGCTGCTGAGAAATTCATGTGCCTTAAGGGAGTTTATACCGTCAGTGAAAGAGGTAGTAACTCGAGATGAAACAGAAGAATCTTTAGTCACAGTTGAGCTTGGAAAGCGGAAGTTGGAGATAAATGGTGGAAAACACACACAACAAGCCTCTAAATTTGAGAGTTCTGATGCTACACAAGCAAAGTCGGTTCAAACTGATACAACAGATGGTCTTAATTGTGCATTAACAAGTAATGGAATGCAAGGCAATCAGAACTACCCACGACATATCACCGTGCAAGTTGTCGAAGGAAACCATGAAAGTAGTACTCAAAATCCATCCCAAGATAAGTTGTTTCGAGACTCAATGTTTCAGCCAATGATAGGAGGGGTTAATGGGCAACCTAAACTTTTTACCAATTCAGCTCCATCAAACATAAGTGAAAATCAAAGTAACACAGGAGAATCCTCCATTCATCAACCGTTTCCTCCTTGTCCTCCCTCCGCGCAACATAATCATGATGATTACCAGACAATTCTTCAGATGTCCTCCACATTTTCAAGTGTTATTGTCTCTACCTTGCTACAAAACCCTGCAGCCCATGCTGCAGCTAGTTTTGCCGCTACATTTTGGCCCTATGCTAATTCCGAAACTTCTGTGGATTCTCCCATGTGTTCCCAAGGAGGTATTCCGTCTAGACAAGTTGGCTCTCCTCCAAGCATTGCTGCTATTGCAGCTGCTACTGTTGGTGCCGCAACTGCATGGTGGGCAGCGCATGGAATGCTTCCTTTGTGTGCTCCACTCCATACTACTTTCCCGTGTCCTCCTTCATCAAGAACTGCAATTCCCTCAATGAATGCTGGTGAAGCACCATCGGTAACAGAACAAGGAGAGATTAATCTACAAAACCCTCCCCTGGAAGATAAGATGTTCAATCCAGAATACTCGGAAACTCAGCAAGCTCAACAACATTCACTTTCTAGCTCACCATTTGAAACTGAGGAGAGTGGAGATGCCAAGTTAAATACTTCTTCAAAGGCTATAAACAATGAGATGAACCATGCAATTTCTGAGCACCTTGATACAAACAAGACGAATGGGAATAAACCGGTTGACCGTTCCTCATGTGGTTCTAACACAACCTCTAGCAGTGAAGAAGCTGATGCACTAGAGAAGGATGAGAAAGAAAAGGAAGAACCTGGACCCGAAACACATAATGTGAACCATTTAGATCCCGAGACTAGCAATCGGCTTAGTTGTAGTAGTAGAAGCATCGGCTACCATACTGATTATTGGAAGGATGTCTCTGATGAGGGGAGACTAGCCTTTCAGGCTCTATTCTCAAGACAAGTGTTGCCCCAAAGCTTTTCACCTCCGAAAAACACAAACTACAAAGATAAAGCTGACCTCGAGAGCAAGAAATGCAGTTCTAATTGTGAACCCCTCGAGAGCAAGAAATGCAGTCCAAATTGCGAACCGGTGCAGAAAACCCAGCCATTTGTAGAAAATAACAATAACGATAACAACGATGAGGAGGGACTGCTAACCATAGGTCTCGGACATGGAAGGCTCAAGACTCGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCGGTAGAGGCCAATGAAAATAATGTAGGAAAGTCCTGCAACCAAGGTGAAGAGAAAGGTCATAAGAGAATACGCTTGGAAGGGGAGAGTTTAATTTGA 2238 0.4339 MDAYSSGEEVVVKTRKPYTITKQRERWTDEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALLKGISIGHALDIEIPPPRPKRKPSNPYPRKTNVGSPTINSRSDQGTVASSHSKEALDLEKEPLPENDEDERPTTVKENKDDNCSKVFAVIQQAPCSSVSSAISASVLLRNSCALREFIPSVKEVVTRDETEESLVTVELGKRKLEINGGKHTQQASKFESSDATQAKSVQTDTTDGLNCALTSNGMQGNQNYPRHITVQVVEGNHESSTQNPSQDKLFRDSMFQPMIGGVNGQPKLFTNSAPSNISENQSNTGESSIHQPFPPCPPSAQHNHDDYQTILQMSSTFSSVIVSTLLQNPAAHAAASFAATFWPYANSETSVDSPMCSQGGIPSRQVGSPPSIAAIAAATVGAATAWWAAHGMLPLCAPLHTTFPCPPSSRTAIPSMNAGEAPSVTEQGEINLQNPPLEDKMFNPEYSETQQAQQHSLSSSPFETEESGDAKLNTSSKAINNEMNHAISEHLDTNKTNGNKPVDRSSCGSNTTSSSEEADALEKDEKEKEEPGPETHNVNHLDPETSNRLSCSSRSIGYHTDYWKDVSDEGRLAFQALFSRQVLPQSFSPPKNTNYKDKADLESKKCSSNCEPLESKKCSPNCEPVQKTQPFVENNNNDNNDEEGLLTIGLGHGRLKTRRTGFKPYKRCSVEANENNVGKSCNQGEEKGHKRIRLEGESLI* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1136 745 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lan16g1136 745 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lan16g1136 745 MobiDBLite consensus disorder prediction 562 582 - -
Lan16g1136 745 MobiDBLite consensus disorder prediction 536 561 - -
Lan16g1136 745 MobiDBLite consensus disorder prediction 88 156 - -
Lan16g1136 745 MobiDBLite consensus disorder prediction 226 247 - -
Lan16g1136 745 PANTHER PROTEIN LHY 2 727 - -
Lan16g1136 745 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lan16g1136 745 MobiDBLite consensus disorder prediction 492 515 - -
Lan16g1136 745 MobiDBLite consensus disorder prediction 536 596 - -
Lan16g1136 745 Gene3D - 26 74 - -
Lan16g1136 745 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lan16g1136 745 MobiDBLite consensus disorder prediction 315 348 - -
Lan16g1136 745 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lan16g1136 745 MobiDBLite consensus disorder prediction 130 156 - -
Lan16g1136 745 MobiDBLite consensus disorder prediction 105 128 - -
Lan16g1136 745 SMART sant 23 71 IPR001005 -
Lan16g1136 745 MobiDBLite consensus disorder prediction 315 335 - -
Lan16g1136 745 CDD SANT 26 69 IPR001005 -
Lan16g1136 745 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lan16g1136 745 PANTHER SWI/SNF COMPLEX-RELATED 2 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1136 Lan-Chr16 18434993 18441688 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan16g1136 Myb_DNA-binding 9.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1136 K12133 - gmx:778086 894.034