Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1135 ATGGAGTTTATGGGTCCCACAAGATTGATCGGAGATTACATAGTGGGACCCAAAATTGGGTCAGGTTCATTCGCAATTGTGTATCGTTCAACACATAGACACACTGGTTTGGAGTATGCAATTAAGGAGATTCATAACAAAAATCTTAGTCCAAAAGTCAAAGAATGTCTTTTCAAAGAAATTTCTATTCTTAGTACTATCAATCATCCCAACATCATTCGTCTCTTCCAAACAATCCAAACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGTGATCTTGCTGCTTACATTCGTCGCCGTGGCAAAGTCTCGGAGGCCACTGCGAGGCATTTCATGAGGCAATTGGCTGCAGGGTTGCAGGTGCTTCAGGAAAAGCACCTTATTCACAGAGATTTAAAACCACAGAACTTACTATTGACAAGTACTTCAGCTACACCATTCTTGAAAATAGGGGATTTCGGTTTTGCGAGGTCTCTCACACCCCAAGGGTTGGCCGATACACTATGCGGTTCACCGTTGTACATGGCTCCAGAGATAATTCAAAACCATAAGTATGATGCCAAGGCTGATTTATGGAGCGTCGGGGCAATATTGTTCCAACTAGTGACCGGAAGGCCACCATTTGAAGGAAATAGCCAATATCAGCTTTTTCAAAACATTTTGAAATCCACCAAACTTCGGTTTCCTCCATCGGCTTTAAGAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAGACTTTTACAACAAAAACCAGTTGAGCGATTAACATTCAAGGAGTTCTTCGATCACAATTTCCTGAAGGAACCCAGGTCAATCATGCATGTTGAGCAGCCTTCATTGCATCCATCCGTAATCTCTGCTTCTAACGAAGTATCTCAATCGCATTATGGGCATCGTTTAAAGTCATTTGTAGACGATTCAAAAGTAGTAATTTCACCTCCCGATGAGACCGTGCTGTTGCAAAGAAGCAATGACAGTGTTCATTTTTCGAAACAACGTGAAGTTTCTGATTTAATGGAGTCCATTGAGAGAAGTTATGTCCTAGTCGATTCTCAATCCGAATCATCGGAAGCTTTCTCTGTTTTTTCTGAAGCATCTATGCAAGATAATTCCACTAGCAGGGTTTCTATCTACTCTTCAAAGAGGACTAATGTGGAAATTGGATTTGCAAAGCAAATAAACGATCCATCTTCTTGCTATGCCGATGGATTAGAAAATTCAAAACGCAACGAGGCTGCTGAATTAGCATCATCCTCTGCATTTGTTGCATTAAGTAAAGTCCACCAGATTTCCTCACCGTGCCCTTCAAACCGGATTAAGTTGTTGCATCTGTATGTGCAGATCCTTGCAGAGCTTTCACACGAAAAGTATAGCGCTGGAGTGTATCTAGAATCGTTCGCAATTAAGTTGGTAGTTTTGGCCATATGGAAGAAAGCTCTAGAAATATGTAACTCTTGGTTGGCCTCTAATAACAAGGGTTTGTTGCATGGAAAAACTTCAGCCAATGAATCCAAAATTCCCTATGAAAGTGGAAATGTGTGTACATCACAAAACACTGAACAGAAAATAAATTTTAGTGATCCTTCATCTGTTTCCTTATGGATCAAACAAGAGTTCATTGTTGCAATTGATTGTGCTGAGAGATTATCATGTCATATTCAAAATATGGATGCCAAGATGCCAGATGCAATGGAGATTATATTCCAAAAAGCACTTTTAGTTGGAAAAAATGGTGCTGTAGAGGAATATATGGAGAACAAAGATAAAGCAACAGCATCTTACACAAAAGCAATGCTTCTATTTTCATTCATTGTTGAAGAAGCAGAGAACCTTTCACTTAACCCATCATTTTCACTCAATGCTGATACTAAGAAGAGAATCTTACAATATATTCTCAACCTTCAATCTCATCAAAAATCTTTATCAGGGTCTTCTTCTAAGGCTGCAACAAAAAATCTTTGA 1977 0.395 MEFMGPTRLIGDYIVGPKIGSGSFAIVYRSTHRHTGLEYAIKEIHNKNLSPKVKECLFKEISILSTINHPNIIRLFQTIQTNDRIYLVLEYCGGGDLAAYIRRRGKVSEATARHFMRQLAAGLQVLQEKHLIHRDLKPQNLLLTSTSATPFLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGRPPFEGNSQYQLFQNILKSTKLRFPPSALRELHSDCLDLCRRLLQQKPVERLTFKEFFDHNFLKEPRSIMHVEQPSLHPSVISASNEVSQSHYGHRLKSFVDDSKVVISPPDETVLLQRSNDSVHFSKQREVSDLMESIERSYVLVDSQSESSEAFSVFSEASMQDNSTSRVSIYSSKRTNVEIGFAKQINDPSSCYADGLENSKRNEAAELASSSAFVALSKVHQISSPCPSNRIKLLHLYVQILAELSHEKYSAGVYLESFAIKLVVLAIWKKALEICNSWLASNNKGLLHGKTSANESKIPYESGNVCTSQNTEQKINFSDPSSVSLWIKQEFIVAIDCAERLSCHIQNMDAKMPDAMEIIFQKALLVGKNGAVEEYMENKDKATASYTKAMLLFSFIVEEAENLSLNPSFSLNADTKKRILQYILNLQSHQKSLSGSSSKAATKNL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1135 658 CDD STKc_ATG1_ULK_like 19 270 - -
Lan16g1135 658 SMART serkin_6 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1135 658 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1135 658 SUPERFAMILY Protein kinase-like (PK-like) 9 331 IPR011009 -
Lan16g1135 658 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 416 636 IPR045269 GO:0004674|GO:0006914
Lan16g1135 658 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 377 IPR045269 GO:0004674|GO:0006914
Lan16g1135 658 PANTHER BNAC06G18300D PROTEIN 7 377 - -
Lan16g1135 658 PANTHER BNAC06G18300D PROTEIN 416 636 - -
Lan16g1135 658 Gene3D Transferase(Phosphotransferase) domain 1 6 383 - -
Lan16g1135 658 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1135 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lan16g1135 658 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1135 Lan-Chr16 18426528 18432848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1135 9 274 CBL-interacting serine-threonine protein kinases AT2G30360 35.662 1.94e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lan16g1135 Pkinase 7.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1135 - K08269 gmx:100782508 806.979