Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1133 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTGTTTCCATAAGTTCCCAAAAGAATGGATCATCATTTGGAGTCACCAAAGCTTCTTTTCTTAGTGGAAGGAAAATGAAAGTGAACAAATACAAAACACCAAATGGAGGAAAATCAAGCACTACAGTGTGTGTAGCAGCTGAACCTGACAGACCTTTGTGGTTCCCAGGCAGCATCCCTCCTCCATGGCTTGATGGCAGTCTCCCTGGAGACTTTGGGTTTGATCCTCTAGGTCTTTCATCTGATCCTGAGAGTCTAAGATGGAATGTTCAATCAGAGTTAGTTCATTGCAGATGGGCAATGTTAGGTGCTGCAGGAATTTTCATTCCAGAATTTCTAACAAAGATTGGTATCTTAAACACACCTTCATGGTACACAGCAGGAGAACAAGAATATTTCACAGACACAACAACACTTTTCATAGTTGAACTCATTTTCATTGGTTGGGCTGAGGGTAGAAGATGGGTTGATATTATCAAACCAGGTAGTGTTAACACTGACCCTATCTTCCCTAACAATAAGCTCACAGGGACTGATGTTGGTTACCCTGGTGGGCTTTGGTTTGACCCTTTTGGATGGGGAAATGGTTCACCTCAGAAGCTTAAGGAATTGAGAACTAAGGAGATTAAGAATGGAAGATTGGCTATGTTGGCTGTGATTGGTGCTTGGTTTCAGCATATTTATACTGGAACTGGTCCTATTGAGAATCTCTTTGCACATCTTGCAGATCCTGGTCATGCTACTGTTTTTGCTGCTTTCACCAACAAGTGA 804 0.4241 MASACASSAIAAVSISSQKNGSSFGVTKASFLSGRKMKVNKYKTPNGGKSSTTVCVAAEPDRPLWFPGSIPPPWLDGSLPGDFGFDPLGLSSDPESLRWNVQSELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWVDIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPFGWGNGSPQKLKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIENLFAHLADPGHATVFAAFTNK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1133 267 Pfam Chlorophyll A-B binding protein 71 237 IPR022796 -
Lan16g1133 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 266 - -
Lan16g1133 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Lan16g1133 267 Gene3D Chlorophyll a/b binding protein domain 72 257 - -
Lan16g1133 267 SUPERFAMILY Chlorophyll a-b binding protein 59 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1133 Lan-Chr16 18397258 18400788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1133 50 267 Chloroplast and Mitochondria Gene Families AT3G61470 88.073 7.04e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1133 K08908 - gmx:100802138 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1133 16 18397258 18400788 Lan11g0601 11 4785948 4787865 PCT
Lan11g0601 11 4785948 4787865 Lan16g1133 16 18397258 18400788 PCT