Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1129 ATGGAAGAAGGTGAAAAGATGGTGTTGTTGTTCATCAGTACTTGCATTATGGCCATTGTTGTTAATGGTGATACAGATCCAAATCATGCTGCTGCTTTAAGAACTTTGTTTCAAAGTCTGAACTCAGCACCCCAGCTAGGTTGGCCTGCTTATAGTAATGGTGATGATCCATGCGGACAGTCTTGGAAGGGAATTACGTGCTCAGGGAACCGAGTTACCGAGATCAAGTTATCTAACCTTGGACTCACCGGAACATTGCCGTACGGATTACAGTTATTGACATCTCTAACCAACCTAGATTTGAGTAACAACAATCTCGGAGGCACCATACCGTACCAACTTCCTCAAAATTTGCACCACTTCAATCTTGCTAATAATAACCTCACTGGGACAGTCCCGTACTCCTTGTCTAATATGACCTCTCTTATCGACCTGAACCTTGGTCACAATCAGTTCCAGCAAGGACTGAGTGTTGACTTTTCAAATCTATCTTCCCTCTCCACCTTGGATCTCTCTTTCAATGTACTGACAGAGGACCTCCCTCAGACTTTGAGCTCACTTTCGGACATAACCTCCATCTATCTGCAAAACAACCAATTCACCGGCACTATCAATGTCCTTGCCAATCTGCCTCTTAAAAATCTGAATGTAGAAAATAATAACTTTACGGGATGGATACCGAAACAGTTGAAAAACATAAACCTACAGACCGGTGGTAATGCATGGAGCTCAGGACCTGCACCACCACCACCTCCTGGAACGCCTCCAGCACCTAAAAGCAACAAACACCATACATCTGGTGGTGGAAGTACCAGCCACTCAGGTTCCGGCAGTGGCACAAGCGATGGGGGTAAAAAGTCTGGTATTGGCGCCGGTGGCATAGCCGGAATTGTGATCTCCATCATTGTTGTTGGGGCAATAGTATTAGTAGCATTCTTTTTGGCGAAGAGAAAACCGAAGAAGTTGTCTTCAGATGTAGAAAAGCTCGACAATCAGTCCTTTGCTCCTCTTCCGTCAAATGGAGTACATGAGGTGAAGTTGCAAACTTCTTCTCTAATTGATGTGAACAAGTTGCAAACTTCTGCCTCAATGAATCTTAAACCGCCACCTATTGATCGTCACAAATCATTTGATGAAGTCGAATTGTCAAAGAAGCCTGCCGTTGTCAAGAAGATTGTAACAGCTCCTCCAAATGTGAAATCATATTCTATAGCCGATCTTCAGATTGCCACTGGCAGCTTCACTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGACGGGTTTACCGTGCTCAATTTGATAATGGGGAGGTTCTTGCAGTGAAGAAGATAGATTCGTCTGTCCTTCCGAATGATTTGTCTGAAGATTTTACAGAAATAGTTTCAAACATCTCCAATTTACATCATCCGAATGTGACAGAGCTCGTAGGTTATTGTTCAGAGTATGGACAACACCTCTTAGTCTACGAGTTTCACAAAAATGGATCCTTGCATGAATTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATACCCGCGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTACATGAAATTTGTTCTCCGTCAGTTGTTCATAAGAATATTAAGTCGGCCAACATATTACTTGATACCGAGCTTAACCCGCATCTTTCGGACTGTGGATTGGCAAGCTATGTTCCAAATGCAGATCAGATACTGAACCATAATATTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACCCTGAAAAGTGATGTCTACAGCTTCGGAGTTGTCATGTTGGAGCTTCTCAGCGGCCGGAATCCATTTGATAGCTCAAGGCCAAGATTGGAGCAGTCATTGGTTAGATGGGCAACACCTCAACTTCACGATATTGATGCATTGGCTAAAATGGTTGATCCGGCACTGGAAGGGCTATACCCTGTTAAATCTCTCTCTCGTTTCGCTGATGTAATCGCTCTTTGCGTTCAGCTAGAGCCTGAATTCCGACCACCTATGTCAGAAGTGGTACAAGCACTGGTTCGGCTAGTGCAGCGAGCTAACATGAGCAGGAGAACATTTGGAAGTGATCAAGGAGGAACCCCAAGAGGCAGTGATGATCCAGCATTACAAGAAGTGTAA 2160 0.4407 MEEGEKMVLLFISTCIMAIVVNGDTDPNHAAALRTLFQSLNSAPQLGWPAYSNGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGTLPYGLQLLTSLTNLDLSNNNLGGTIPYQLPQNLHHFNLANNNLTGTVPYSLSNMTSLIDLNLGHNQFQQGLSVDFSNLSSLSTLDLSFNVLTEDLPQTLSSLSDITSIYLQNNQFTGTINVLANLPLKNLNVENNNFTGWIPKQLKNINLQTGGNAWSSGPAPPPPPGTPPAPKSNKHHTSGGGSTSHSGSGSGTSDGGKKSGIGAGGIAGIVISIIVVGAIVLVAFFLAKRKPKKLSSDVEKLDNQSFAPLPSNGVHEVKLQTSSLIDVNKLQTSASMNLKPPPIDRHKSFDEVELSKKPAVVKKIVTAPPNVKSYSIADLQIATGSFTVDHLVGEGSFGRVYRAQFDNGEVLAVKKIDSSVLPNDLSEDFTEIVSNISNLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHEFLHLSDEYSKPLIWNTRVKIALGTARALEYLHEICSPSVVHKNIKSANILLDTELNPHLSDCGLASYVPNADQILNHNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRNPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTFGSDQGGTPRGSDDPALQEV* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1129 719 MobiDBLite consensus disorder prediction 237 285 - -
Lan16g1129 719 Gene3D Phosphorylase Kinase; domain 1 375 491 - -
Lan16g1129 719 PANTHER OS01G0253100 PROTEIN 15 715 IPR045271 GO:0004714|GO:0006468
Lan16g1129 719 SUPERFAMILY L domain-like 32 232 - -
Lan16g1129 719 MobiDBLite consensus disorder prediction 697 719 - -
Lan16g1129 719 PRINTS Leucine-rich repeat signature 96 109 - -
Lan16g1129 719 PRINTS Leucine-rich repeat signature 163 176 - -
Lan16g1129 719 Gene3D Ribonuclease Inhibitor 179 244 IPR032675 -
Lan16g1129 719 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 15 715 - -
Lan16g1129 719 MobiDBLite consensus disorder prediction 259 283 - -
Lan16g1129 719 SMART LRR_typ_2 93 117 IPR003591 -
Lan16g1129 719 SMART LRR_typ_2 163 187 IPR003591 -
Lan16g1129 719 SMART LRR_typ_2 139 162 IPR003591 -
Lan16g1129 719 SUPERFAMILY Protein kinase-like (PK-like) 395 686 IPR011009 -
Lan16g1129 719 Gene3D Transferase(Phosphotransferase) domain 1 493 704 - -
Lan16g1129 719 MobiDBLite consensus disorder prediction 244 258 - -
Lan16g1129 719 Pfam Protein tyrosine and serine/threonine kinase 416 686 IPR001245 GO:0004672|GO:0006468
Lan16g1129 719 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Lan16g1129 719 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Lan16g1129 719 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lan16g1129 719 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1129 Lan-Chr16 18361185 18369032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1129 1 703 Strubbelig Receptor Gene Family AT1G53730 65.358 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan16g1129 PK_Tyr_Ser-Thr 6.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1129 - - gmx:100807707 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1129 16 18361185 18369032 Lan11g0594 11 4710526 4717917 PCT
Lan16g1129 16 18361185 18369032 Lan9g1024 9 17481203 17488710 PCT
Lan16g1129 16 18361185 18369032 Lan2g0873 2 19118762 19126700 PCT
Lan11g0594 11 4710526 4717917 Lan16g1129 16 18361185 18369032 PCT
Lan9g1024 9 17481203 17488710 Lan16g1129 16 18361185 18369032 PCT
Lan2g0873 2 19118762 19126700 Lan16g1129 16 18361185 18369032 PCT