Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1115 ATGGGAAGGGCAGGGAAATGGATTAGAAACTTTCTACTAGGGAAAAAGGAAGAGAAGCACAAGAAGATTGATACACTTTTCTCTGAGAATAAGAGTGCCAGCATGATTGAAAGTCAAATGATAAGTCCTAATATGAAGCGTAGATGGAGTTTTGGAAGATTGAAAGGTGGAAGTGGAAGAAAAACAAACATGATAGCAGGACATAAATTTTCTATATCTTTTGACTCAGGTGATTCTGCTAAATTTCAAATCCAAGCCTTGTTGGAAACTCATGATTCAAAGAGTTTTCCAACAATACTATCACAGGTTTCTAGATACAGAAAAGATAAAAGTGTAGCTGCTACGAAGATTCAGGCTGCTTTTCGCTCATATTTGGCAAGGAGAGCATTACATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTGGTAAGGGGATACCTTGTAAGGAAGCAAACAACTGCTACACTGCGTGGCATGCATGCATTGATGGCCATCCAAGTTAGAACCCGAATTCACAGAATTCAGAAGGTAGAAGAAGCAAATCTTCTTGGAAAACAGCCTCCGGAACATAGAGAAAGTCCTCACCACAAAGGTCTCAAAAGAAAAAATAAAAACTCAAAGGGTATGAGTGTGGATGAAATGCTGGAGACTTTGAAAAGCAGAAATGCCCCTCGAGATCGTTCACATGTGAAGAGTATGGAGCATGATCCCACGACATCCTATTCAAACAGTAGGTCAGTTTCAAAACATCAATACAGGGAGAATACTTCAATCACAGCACCAAACAGCCCAGAAAACTACAGATTCATGTTTGAAATGAACCCAACAACAATAGCATTATCAACTTCTGAGCACCACCAAGGGTCTCACAATCAATCATGGTCACCAAGTTACATGAACAAGACACAATCTTCAAAGGCAAAAGCAAGGTCTCATAGTGAACCAAAACAACGACCCAAAAAGGGAATGAGGCACAAAAGCAAGTCTATAGAATCTACCAATGAACTTAGTACCTCACTGAATGGTCCAAGGCATAGTGTGTCCTCTGAGTCCTCACGCATTGATCAAAGAAGCTTCGATCATTGGATTATTAACCACTATGGGTCAACGAAAGATGGTGGGCACGACTCCTATGGCAGCATCATGGTTAATAGTGATTCATACTATTGA 1170 0.4034 MGRAGKWIRNFLLGKKEEKHKKIDTLFSENKSASMIESQMISPNMKRRWSFGRLKGGSGRKTNMIAGHKFSISFDSGDSAKFQIQALLETHDSKSFPTILSQVSRYRKDKSVAATKIQAAFRSYLARRALHALRGLVKLQALVRGYLVRKQTTATLRGMHALMAIQVRTRIHRIQKVEEANLLGKQPPEHRESPHHKGLKRKNKNSKGMSVDEMLETLKSRNAPRDRSHVKSMEHDPTTSYSNSRSVSKHQYRENTSITAPNSPENYRFMFEMNPTTIALSTSEHHQGSHNQSWSPSYMNKTQSSKAKARSHSEPKQRPKKGMRHKSKSIESTNELSTSLNGPRHSVSSESSRIDQRSFDHWIINHYGSTKDGGHDSYGSIMVNSDSYY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1115 389 Gene3D - 110 164 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 332 349 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 235 264 - -
Lan16g1115 389 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 376 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 281 306 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 218 234 - -
Lan16g1115 389 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Lan16g1115 389 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Lan16g1115 389 Pfam IQ calmodulin-binding motif 137 151 IPR000048 GO:0005515
Lan16g1115 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 152 IPR027417 -
Lan16g1115 389 Pfam Protein of unknown function (DUF4005) 263 352 IPR025064 -
Lan16g1115 389 MobiDBLite consensus disorder prediction 179 267 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 281 354 - -
Lan16g1115 389 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Lan16g1115 389 PANTHER IQ-DOMAIN 5-RELATED 1 376 - -
Lan16g1115 389 MobiDBLite consensus disorder prediction 179 194 - -
Lan16g1115 389 SMART iq_5 109 131 IPR000048 GO:0005515
Lan16g1115 389 SMART iq_5 132 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1115 Lan-Chr16 18249071 18251638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1115 1 319 IQD Protein Family AT4G14750 34.451 2.61e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1115 - - lang:109345769 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0839 4 10353924 10357401 Lan16g1115 16 18249071 18251638 LSH