Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1105 ATGGCATCATCTGATCAACACGACACCGTTTTCGGCGATGAAGACATTGACGACGACGAAGAAGAAGAAGAACTAGACGACGACGTTTTACCTGACGACGACGAAAACGATCCTTTCCCTTCCACTTCCTCCGTCCTCGCCGTCACCATCGCCGTTGCACCTCCGATCTCACCCGCCACAACCGCCTCCGACTCAAAACGCAACCAAATCGAGGAGAAAAAACCAATCGATGATTCTCGTAAACTATTTCAGCGTCTTTGGACCGATGAAGACGAGATCGAACTCTTACAAGGCTTCCTCGATTACACTTCGCACCGTGGATCTTCTCATCACAATGACACTGCTTTGTTCTACGATCAAATCAAATCTAAGTTTCAAATCGATTTCAATAAGAACCAGCTCGTTGAGAAGATTCGAAGGTTGAAGAAGAAGTACCGTAACGTTCTTAACAAAATCAATTCCGGTAAGGAATTTTCATTCAAAAGCCCTCACGATCAAGCAACTTTCGAAATTTCGCGCAAGATCTGGAGCAATATTGGTCAAATCAGTGGCGGTTTCGTCGTTGATGATAATGTGTTGGATGAAGATGAAATCAACCTCAATTCAAATCAAAACCCTAACAACCATTACCCTAACCATAACCCTAACATTAATCTCAATTTAGTTCAGTCGATGCCAAAATATGAGGCGGTGATGCTCGGGAATTCAGGGGAGAAGAAATTCACGCCGTCAAGGAAGAGGTCACGGCCACGATCGACGATGTTGAGGATCGATGAGAAACCACAGGTTTTGTTTAATGATGGATCAGGATCGGGATTAGGGTTGAATTTGAATTTGAACAAGGATCATAATTGCATTATCAATTCTAACACTGCTGCTGCTAATGTTAACAATGATAAGAATTATGAGAATAATTGTAACAGTGAGCAGCAGCATATTAATAGTATACCTGGTTTGGTTGAAGAAACGGTTCGGAGTTGTTTGACTCCGGTGTTGAAGGAGTTAATGGGTGGTGGTGTCATGGGAGGGGGATCGTTTGGGGCGAGAGGGTTTGGAATTGCAGGGTTTGGATCGTTGAATTCGATGCAGATGCCGATGGTGATGCCGTTGAGTTATTTGGGTTTAGGGAGTGGTGGACATGTGGTGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGTTGGAAGTGTATGCGAAGCGGTTGGAGCTGGTGCAGGATCAAATCAAGGCTGCACTGGGGGAGTTGAGATCGGCTGGAGGATGA 1263 0.4481 MASSDQHDTVFGDEDIDDDEEEEELDDDVLPDDDENDPFPSTSSVLAVTIAVAPPISPATTASDSKRNQIEEKKPIDDSRKLFQRLWTDEDEIELLQGFLDYTSHRGSSHHNDTALFYDQIKSKFQIDFNKNQLVEKIRRLKKKYRNVLNKINSGKEFSFKSPHDQATFEISRKIWSNIGQISGGFVVDDNVLDEDEINLNSNQNPNNHYPNHNPNINLNLVQSMPKYEAVMLGNSGEKKFTPSRKRSRPRSTMLRIDEKPQVLFNDGSGSGLGLNLNLNKDHNCIINSNTAAANVNNDKNYENNCNSEQQHINSIPGLVEETVRSCLTPVLKELMGGGVMGGGSFGARGFGIAGFGSLNSMQMPMVMPLSYLGLGSGGHVVDEKWRKQQILELEVYAKRLELVQDQIKAALGELRSAGG* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1105 420 PANTHER BNAANNG10740D PROTEIN-RELATED 1 419 IPR007592 GO:0006355
Lan16g1105 420 Pfam Protein of unknown function, DUF573 83 177 IPR007592 GO:0006355
Lan16g1105 420 MobiDBLite consensus disorder prediction 11 35 - -
Lan16g1105 420 PANTHER BNAANNG10740D PROTEIN 1 419 - -
Lan16g1105 420 Coils Coil 131 151 - -
Lan16g1105 420 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1105 Lan-Chr16 18173381 18175092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1105 3 417 GeBP Transcription Factor Family AT5G28040 44.060 3.75e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lan16g1105 DUF573 5e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1105 - - gmx:100790030 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0845 4 10393323 10395207 Lan16g1105 16 18173381 18175092 LSH
Lan2g0313 2 2718778 2720605 Lan16g1105 16 18173381 18175092 LSH