Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1100 ATGGAATTTGATAGACTGGGACCCTCCGATCCAGGTGGCTCTTCCCGCCGCTCCACCGCACCGCTCACCAAATCAACCACCAATTCCTCCTCCGCCTCGGGAATCTGTAAAAAGAAACTCATCATACTCACAGTCATCGCCGCCGTCTTAATCATTACGTCCGCCGCAATCTCCGCCACTCTTGTCACACTCAACCGCTCAAGAGCTCGAAATCAATCCTCACCGGAGCTCCTCCGCGGCAAACCCACTGAAGCAATCTCAAGAACTTGCAGCAAGACACTATTCCCAACTCTTTGCATCAACTCTCTCCTTGAATTCCCAGGCTCCACAACCGCCACCGAACATGATCTCATTCATATATCCTTCAACATGACCCTCCGCCACGTCAGCAGTGCATTCTTCGCATCATCTACCCTCACCAACCCCTATCCCGAAACCACGATAATTGACTCGCGCCAGCGCGCTGCTTACGAGGACTGCCTCGAACTGCTCGAGGAGTCCACTTACGCGCTGGCGCGGGCCCTCACATCGGTCGCGCCCCTCTCAGTAGCAACAACGACGACAGAATTTGCTGCTGAGCGCGGCTCGACTGATGATGTGATGACGTGGCTCAGCGCTGCGCTCACGAATCATGACACGTGCGCGGAGGGGTTCGAGGATACTAACGGGACTGTTAAGGATGAGATGGTTAATAACTTGAAGGACTTGTCGGAACTCGTGAGTAATAGTCTCGCGATATATTCCGCGAGTCAAAGAGATGATGACGATTTCTCTGGAGTTCCGATACAGAACAAAAGACGATTGATGATGAACATAGGAGAAGAAGATAACGTTCACAGTAATGAAAATATCTCGCGAGATTTTAAATTCCCGGGATGGTTGAATAAACGAGATAGGAAATTGATGAGTTTATCGGTATCGGAGATACAAGCCGATATAATCGTGTCAAAGAATGGGAACGGAACGGTGAAGACAATTACTGAAGCAATTAAAATAGCACCAGAGCATAGTAATCGCCGATTCATAATTTACGTGAGGGCAGGAAGATATGAAGAGAATAACTTAAAGATTGGAAAAAAGAAAACGAATATAATGTTGATTGGTGATGGGAAGGGGAAAACGATCATCACAGGGAGAAAGAATGTTGCTGATGGCATGACCACATTCCATACTGCATCCTTTGCCGCTAGTGGTGCTGGTTTCGTTGCACGGGACATCACGTTTGAAAACTACGCTGGACCAGAGAAGCATCAAGCAGTGGCTCTCCGTGTCGGAGCTGACCACGCGGTGGTGTATCGATGTAGTGTCATCGGTTACCAAGACACATGTTATGTGCACTCCAATCGTCAATTCTTTCGCGAATGTGACATTTATGGTACCGTTGATTTCATATTTGGAAACGCGGCCGTAGTTTTTCAAAAGTGTAATATTTATGCTCGCAAGCCCATGGCCCAACAGAAAAATACAATCACGGCCCAAAATCGGAAAGACCCAAATCAAAACACAGGTATATCCATCCACGATTGTCGTATCCTACCCGCACCGGATCTTGCTACGGTGAAGGGTAGTATCCCTACCTATTTGGGTCGTCCATGGAAATTATATTCTAGAACTGTATACTTATTATCCTACATTGGTGACCACGTGCATCCCAATGGATGGTTGGAATGGAATGGAGAGTTTGCATTAGACACATTGTATTATGGAGAGTACATGAACTATGGGCCGGGTGCAGCCATCGGACAGCGAGTTAAATGGCCTGGATATCGGGTCATCACGTCGACCGTGGAGGCTAACAGATTCACCGTAGCCCAATTCATCTCCGGTTCGGCGTGGTTGCCATCCACCGGAGTGGCTTTTTTGGCTGGGTTATCCACTTGA 1881 0.4817 MEFDRLGPSDPGGSSRRSTAPLTKSTTNSSSASGICKKKLIILTVIAAVLIITSAAISATLVTLNRSRARNQSSPELLRGKPTEAISRTCSKTLFPTLCINSLLEFPGSTTATEHDLIHISFNMTLRHVSSAFFASSTLTNPYPETTIIDSRQRAAYEDCLELLEESTYALARALTSVAPLSVATTTTEFAAERGSTDDVMTWLSAALTNHDTCAEGFEDTNGTVKDEMVNNLKDLSELVSNSLAIYSASQRDDDDFSGVPIQNKRRLMMNIGEEDNVHSNENISRDFKFPGWLNKRDRKLMSLSVSEIQADIIVSKNGNGTVKTITEAIKIAPEHSNRRFIIYVRAGRYEENNLKIGKKKTNIMLIGDGKGKTIITGRKNVADGMTTFHTASFAASGAGFVARDITFENYAGPEKHQAVALRVGADHAVVYRCSVIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLATVKGSIPTYLGRPWKLYSRTVYLLSYIGDHVHPNGWLEWNGEFALDTLYYGEYMNYGPGAAIGQRVKWPGYRVITSTVEANRFTVAQFISGSAWLPSTGVAFLAGLST* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1100 626 Pfam Plant invertase/pectin methylesterase inhibitor 85 246 IPR006501 GO:0004857
Lan16g1100 626 PANTHER PECTINESTERASE 32 624 - -
Lan16g1100 626 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 248 IPR035513 -
Lan16g1100 626 SMART PMEI_2 81 246 IPR006501 GO:0004857
Lan16g1100 626 MobiDBLite consensus disorder prediction 12 31 - -
Lan16g1100 626 PANTHER PECTINESTERASE 32 624 - -
Lan16g1100 626 ProSitePatterns Pectinesterase signature 2. 457 466 IPR033131 -
Lan16g1100 626 MobiDBLite consensus disorder prediction 1 31 - -
Lan16g1100 626 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 249 IPR035513 -
Lan16g1100 626 CDD PMEI-like_3 90 246 - -
Lan16g1100 626 SUPERFAMILY Pectin lyase-like 309 623 IPR011050 -
Lan16g1100 626 Pfam Pectinesterase 312 609 IPR000070 GO:0030599|GO:0042545
Lan16g1100 626 TIGRFAM PME_inhib: pectinesterase inhibitor domain 75 247 IPR006501 GO:0004857
Lan16g1100 626 Gene3D - 305 624 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1100 Lan-Chr16 18125787 18131875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1100 1 625 Carbohydrate Esterase AT5G53370 60.828 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1100 - - lang:109330048 1211.82