Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1064 ATGCAAGATATTTTCGGATCAGTTCGGCGATCACTGGTGTTCCGTGGTTCGCCGGAGAACGAAGAACCTTTGTCTTCTCTCAGAGGAACCATTGTTGACAAGATCAGTTGTTGCATTCGAAATTCTAGAGTATTTTCCAAACCGTCGTCATCTCCGCCGTTGCCTCCGCCGCCGCCGACTACGATACGATGGCGCAAGGGCGAGTTGATTGGATGCGGTGCCTTTGGTCATGTTTACGTTGGAATGAATCTCGATTCTGGAGAGCTTCTAGCAGTTAAACAGGTTCTGATTGCGGCAAGTAGCGCTTCGAAGGAGAAGGCACAGGCTCACATAAAAGAGCTCGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACAGTTAGAGAGGAGGACACTTTAAATATTCTCTTGGAGTTTGTTCCTGGTGGATCCATATCATCACTATTAGGGAAGTTTGGATCTTTCCCTGAGGCTGTCATAAGAACTTACACAAAACAAATACTGGTTGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGAGACATCAAGGGAGCCAATATCCTCGTAGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCATCCAAGCAAGTGGTTGAGCTGGCTACTATTTCTGGTGCCAAATCTATGAAAGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTTCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGCGTTGGTTGTACTGTGATTGAGATGGCCACGGGAAAGCCTCCATGGAGTCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACGACCAAGGCTCATCCGCCAATCCCTGATCATCTATCTGTTGGAGCAAAAGATTTCCTGATAAAATGTTTGGAGAAGGAACCAAATTTGAGACCATCAGCCTCAGAATTGCTGCAGCATCCCTTTGTTACTGGTGAATCTGTGGATATTCCTCCTCTGTCATCCACTGAGTTGGGAAATTTTGAAGCTCCATCATGTGCCCCAAATGTTGAACCCTTCCTTTGCTCAACTGAAGATTCTCAGGACCTGGGAAATAAACAGTTGTGGGGAATGAGCAATGATGATGACATGTGTGTGATTGATGACAAAGATGAGTTCTTTCAGTGTGGTGACAAACAAAAATCATCGATGCCAGAGAATATTGAGAGTTTCAACCCAATGTCTGATCCTTCTGATGACTGGGGGTGTAAATTTGATGCAAGTCCAGAACTGGACCATAGAGAAGTTCACTCGGGCATTGATGAAAGTTACATGCCACCCGGTCATTCGGGGGAAAATAACGGGCATAAAGATTTTTCCTTTCCAAGTGTGCCATCTCTGACAGAGGACGATGAGGAGCTCACAGAGTTAAAAATTCAAGACTTTTTAGCTGAGAAGGCTCTTGAACTAAAAAAACTTCAGACACCTTTATACGAAGAGTTCTATAACACTTTAAATACATCTTGCTCTCCCAATGTGATCAGTAGCCCAAGTGATGAAACTGGTTCCCGAAGATACTTGAAATTACCCCCTAAAAGCAGGTCACCAAGTCGGGCACCAAGTAGCACTTCATCGAAAGCAGTTGACAATGCTGGAAGTCCTGGAAGTAATGACAGGTCCTCATCAATTTTAAGCAATCTAAATGATCATGTTTCAAAGGATATTCCGGCATCTCCCCTTACTGAAAGGAGAAGACTGATAGTTGACTCCCAGCAAGATCCAAGTAGCCCGAGTCTAAGCAATTCTGAGAGATTGAGGAAGTGGAAAGAAGAACTTGACCGAGAGCTTGAGAGAGAGCGAGAAATGATGCGCCAAACTGGTATGGGAGCTTTACATAGGCAAAGAGAACGGTCGAGATTTGCATCGCCCAGCTAA 1926 0.4434 MQDIFGSVRRSLVFRGSPENEEPLSSLRGTIVDKISCCIRNSRVFSKPSSSPPLPPPPPTTIRWRKGELIGCGAFGHVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGSFPEAVIRTYTKQILVGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKAHPPIPDHLSVGAKDFLIKCLEKEPNLRPSASELLQHPFVTGESVDIPPLSSTELGNFEAPSCAPNVEPFLCSTEDSQDLGNKQLWGMSNDDDMCVIDDKDEFFQCGDKQKSSMPENIESFNPMSDPSDDWGCKFDASPELDHREVHSGIDESYMPPGHSGENNGHKDFSFPSVPSLTEDDEELTELKIQDFLAEKALELKKLQTPLYEEFYNTLNTSCSPNVISSPSDETGSRRYLKLPPKSRSPSRAPSSTSSKAVDNAGSPGSNDRSSSILSNLNDHVSKDIPASPLTERRRLIVDSQQDPSSPSLSNSERLRKWKEELDRELEREREMMRQTGMGALHRQRERSRFASPS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1064 641 MobiDBLite consensus disorder prediction 600 641 - -
Lan16g1064 641 SMART serkin_6 64 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1064 641 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Lan16g1064 641 MobiDBLite consensus disorder prediction 505 641 - -
Lan16g1064 641 MobiDBLite consensus disorder prediction 532 569 - -
Lan16g1064 641 CDD STKc_MAPKKK 63 327 - -
Lan16g1064 641 Coils Coil 97 124 - -
Lan16g1064 641 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 605 - -
Lan16g1064 641 Coils Coil 602 622 - -
Lan16g1064 641 MobiDBLite consensus disorder prediction 444 465 - -
Lan16g1064 641 Gene3D Transferase(Phosphotransferase) domain 1 62 342 - -
Lan16g1064 641 SUPERFAMILY Protein kinase-like (PK-like) 63 328 IPR011009 -
Lan16g1064 641 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 605 - -
Lan16g1064 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Lan16g1064 641 Pfam Protein kinase domain 65 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1064 641 ProSiteProfiles Protein kinase domain profile. 64 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g1064 641 MobiDBLite consensus disorder prediction 505 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1064 Lan-Chr16 17822165 17827093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1064 1 640 MAP Kinase Kinase Kinase AT1G54960 54.871 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan16g1064 Pkinase 2.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1064 K20606 - gmx:100807537 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0510 4 7717100 7719140 Lan16g1064 16 17822165 17827093 LSH
Lan2g0290 2 2476315 2481325 Lan16g1064 16 17822165 17827093 LSH