Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1044 ATGATGATGATGACAATGGAGGGAATGATGGATAATAATGTATTAGATGATGTGATAAGAAGATTATTGGAAGGTAAAGGAGCTAAACAGGTTCAATTATCTGAGTCTGAAATTCGTCAACTTTGTGTCAATGCTAGACAAATCTTCCTCTCCAATCCTATTCTTCTTGATCTCTCTGCTCCTATTCGCGTTTGTGGTGATATACATGGTCAGTACCAAGACTTACTGAGGGTATTTGAATATGGAGGCTACCCTCCTGCAGCAAACTACTTGTTCTTGGGGGATTATGTCGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCGGACAAAATTCATCTCTTGAGAGGAAACCATGAAGACGCAAAGATAAACCGGATTTATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTCACTGACTGCTTTAACTGTTTGCCGGTAGCTGCACTCATCGATGGCAAAATACTTTGTATGCATGGGGGTCTCTCTCCGGAATTACAAAATTTGAATCAGATAAAGGAGATTCAAAGGCCTACTGAAATTCCGGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGACGGCTGGGCGGACAGTGACCGAGGAGTTTCATGTAACTTTGGATCTGATGCAGTCACTGAGTTTTTGGATAAAAATGATCTTGATCTCATTTGCAGAGGTCATCAGGTTGTAGAGGATGGATATGAGTTTTTCGCTAAACGGAGATTAGTCACGATATTTTCTGCTCCAAATTATGGCGGGGAGTTTGATAATGCTGGTGCATTGTTGAGTGTTGATGAATCTCTCGTGTGCTCCTTCGAGATATTAAAACCTATCGATAGAGGATCTTCATCAAAGATGAATCTTAAGAAGCCTCCTAAACTCGGAAAAGTTTAG 966 0.4006 MMMMTMEGMMDNNVLDDVIRRLLEGKGAKQVQLSESEIRQLCVNARQIFLSNPILLDLSAPIRVCGDIHGQYQDLLRVFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQNLNQIKEIQRPTEIPDNGLLCDLLWSDPDSSIDGWADSDRGVSCNFGSDAVTEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDRGSSSKMNLKKPPKLGKV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1044 321 SMART pp2a_7 33 303 IPR006186 GO:0016787
Lan16g1044 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 317 - -
Lan16g1044 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 317 - -
Lan16g1044 321 SUPERFAMILY Metallo-dependent phosphatases 28 304 IPR029052 -
Lan16g1044 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Lan16g1044 321 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Lan16g1044 321 Gene3D - 8 311 IPR029052 -
Lan16g1044 321 Pfam Calcineurin-like phosphoesterase 61 253 IPR004843 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Lan16g1044 321 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1044 Lan-Chr16 17652641 17655721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1044 56 249 Calmodulin-binding Proteins AT5G63870 31.878 5.24e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1044 K06269 - gmx:100805030 608.986