Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1039 ATGGGAACAGAACAACTTTTACCATTTTCTGTTGTGTCTGTGGTTGATGATGTTCCTGAACATCATGGTGATAGATTGAGTGATGTTAACTTGGCTTCAAGGAAAGCTGAAGAAACTTCTTTGAGAAGGTATGAAGCAGCTGGTTGGCTTAGAAAGACAGTTGGAGTTGTTGGAGGGAAAGACTTACCAGCTGAGCCTTCTGAAGAAGATTTTCGGCTCGGATTGCGTAGCGGGATTATACTCTGCAATGTTCTTAATAAAATTCAACCTGGATCAGTGCCTAAGGTAGTTGAAGCCCCCAATGATTCTGTTCTTATTCCTGATGGGGCAGCACTCTCTATATATCAATACTTTGAAAATGTGAGGAACTTTCTTGTAGCTATGGAGGAAATGGGGATTCCGACCTTTGAAGCTTCTGATTTGGAACAGGGTGGAAAATCTTCAAGGGTAGTGAATTGTGTTTTAGCACTTAAGTCCTATGCTGAATGGAAGCAAGGAGGGGAAATTGGAACATGGAAATATGCGGGGATCGGGACTCCAAAGCCAACTACATCCGCGAAAACAGTTTTGAAGAAGATCTCAGAACCATTCATGAAGTCTTTAAGGATTACGCCATCGAGTGATAGAGATGTTATGAGTGATTACTCTCAAAATAGCGATTCCGGGCATGATGGAAATGAAGGGGATTCTCTTCCTTCATTACATTCATTAGTTCGCGAATATTTATGTGACAAGAGGCCTGAAGAAATTCCCATTGTTGTGGAAACCCTGCTTAGCAAAGTCTTGGAGGAGTGTGAACGTCGAACGCAAATCCAAAATGAAACCCTTAAAACAACTCAAGAAGAAAAGGTACCTTCGGAAGTAGAATGTTCAAATTCAAAAGCTGCTTCTTCTATTGATGAAGAGATGGAAGAAAAGGAAGATGCACAAGACCTGCAGAGTAGAGAGGAACTACAAGATGAATCTTATGATAAGGACAATAGCCATGAAGAATCGAGTAGCCGGAATTTGAAGGCGCAAGAATTAATTCAACAACAAAATAGAAGCATCCAGGAATTGAAAACTATAGTCTATGAAACAAAATCCGGAATGCAATTTCTGCAAAAGAGATACCAGGAAGAGATCATCTATCTAAGTAAGCAACTGTATGGCCTAGCTTCTGCTGCATCAGGATATCATAAAGTTATCGAAGAAAATCGCAAGTTATACAATCAAGTACAGGACCTGAAAGGAAATATTCGTGTGTACTGCCGAGTTCGACCGTTCTTAGGCGGCCAAACAAGCCATAATAGCTCTGTCAGCAATGTGGAGGAGGGAAGTATCTCAGTCGTAACACCTTCCAAATACAGCAAAGAAGGGACGAAGACATTTACTTTCAATAGAGCATTTGGTCCTTCTGCAACCCAAGCGGAAGTTTTCTCAGATATGCAGCCTCTGGTTCGTTCTGTTTTAGACGGGTACAATGTTTGTATATTTGCCTACGGCCAGACAGGATCAGGAAAAACACACACTATGTCTGGACCGGACGAACTTAATGAGGAAACAATAGGTGTCAATTACCGTGCATTGAGAGATCTTTTCCTTCTCTCGGAACAACGGAAAGAGACCATTTTCTATGATATCAGTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTACTAACCACAGATGGTGTTAACAAAAGATTAGAAATCCGCAACAGTTCCCAAAACGGCATTAACGTGCCAGATGCAAGCCTTGTTCCTGTTTCATCAACTTCAGATGTCATAAGTTTGATGAACTTCGGACATAAGAATCGAGCTGTTGGTTCCACTGCCATGAACGATCGTAGTAGTCGTTCTCACAGCTGCTTGACAGTTCATGTTCAAGGAAAGTACCTGACATCGGGAACTACGATTCGCGGCAGTATGCATCTTGTCGACTTGGCAGGAAGTGAGAGGGCTGATAAATCTGAGGCCACAGGGGATAGACTTAAGGAAGCTCAACATATCAACAAGTCACTTTCAGCCTTAGGAGATGTCATTGCTTCACTAGCCTCAAAGAATGCTCATGTTCCATACCGAAATAGTAAACTTACTCAGCTTCTTCAGGATTCACTAGGAGGACAAGCTAAGACACTTATGTTTGTTCATATTAGTCCTGAGCTTGAAGCTCTTGGAGAAACACTTAGTACACTGAAGTTTGCTGAAAGGGTTTCAACTGTTGAACTTGGTGTTGCTAGAGTTAATAAATCTAATAATAGTTCTGATGCCAGAGAGCTTAAAGAACAGATTGCTAGTCTAAAGGCAGCCTTGGCTAAGAAGGATGGAGAAGCAGGACGGTTTCAACAATCTGCCAATAGTAGTAGCATTGAATCACCAAGGTCTAAATCCTATGGATTTTCTCCTATGAGATTTGGAACCAAAAAGCTAAGAGATGATTCTAGTACCCGAGAGGGACAGAAAAATGGTGCATCAAAGCTGAAAAGAAGAAGCTTAGATATCCATGAAATGTATAGGAATTCACCTCAATGGCCACATGTTGGAAAACCTATGACAAATGCAAAGGAAGATGATAAGGAATCATCATCAACTTCTAGTGATTGGATTGATAAGACTATGATCAAAAGGAATGATAGCTTAACTAGTATTGATAGCTTAATGGGTCAATGGGAAACATCAAGTCCAAAATCTATTCCAGATACTTCAAAAATGTCCATTGAACCTTCATTGCTTGGTTATGATATGAATATCAATGATGAATTTGATGAGCTTGAGATTGCAACTAGTGATTCTTCAGAATCAGATATGAATTGGTTATCATCAACTATACCTAAACCAATCAGCATTTCAAATGAATTAGCTTCTATGCCAAAGAAATCATCAACTCTAGCCAAATCATCAAAGATCCCAGAACCCAGGAGTATGATACCATCATCAATTCCTACTCCATCAAGGAAAAATCCTACCCTAGTTAGTCAACCCAAAAAGCAACTTGGGTATGTTGATGTAAAGAGAAGAACCACCAAATGA 3021 0.4035 MGTEQLLPFSVVSVVDDVPEHHGDRLSDVNLASRKAEETSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRLGLRSGIILCNVLNKIQPGSVPKVVEAPNDSVLIPDGAALSIYQYFENVRNFLVAMEEMGIPTFEASDLEQGGKSSRVVNCVLALKSYAEWKQGGEIGTWKYAGIGTPKPTTSAKTVLKKISEPFMKSLRITPSSDRDVMSDYSQNSDSGHDGNEGDSLPSLHSLVREYLCDKRPEEIPIVVETLLSKVLEECERRTQIQNETLKTTQEEKVPSEVECSNSKAASSIDEEMEEKEDAQDLQSREELQDESYDKDNSHEESSSRNLKAQELIQQQNRSIQELKTIVYETKSGMQFLQKRYQEEIIYLSKQLYGLASAASGYHKVIEENRKLYNQVQDLKGNIRVYCRVRPFLGGQTSHNSSVSNVEEGSISVVTPSKYSKEGTKTFTFNRAFGPSATQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTHTMSGPDELNEETIGVNYRALRDLFLLSEQRKETIFYDISVQMLEIYNEQVRDLLTTDGVNKRLEIRNSSQNGINVPDASLVPVSSTSDVISLMNFGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKYLTSGTTIRGSMHLVDLAGSERADKSEATGDRLKEAQHINKSLSALGDVIASLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPELEALGETLSTLKFAERVSTVELGVARVNKSNNSSDARELKEQIASLKAALAKKDGEAGRFQQSANSSSIESPRSKSYGFSPMRFGTKKLRDDSSTREGQKNGASKLKRRSLDIHEMYRNSPQWPHVGKPMTNAKEDDKESSSTSSDWIDKTMIKRNDSLTSIDSLMGQWETSSPKSIPDTSKMSIEPSLLGYDMNINDEFDELEIATSDSSESDMNWLSSTIPKPISISNELASMPKKSSTLAKSSKIPEPRSMIPSSIPTPSRKNPTLVSQPKKQLGYVDVKRRTTK* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1039 1006 MobiDBLite consensus disorder prediction 208 226 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 949 965 - -
Lan16g1039 1006 SMART ch_5 42 160 IPR001715 GO:0005515
Lan16g1039 1006 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1003 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 803 833 - -
Lan16g1039 1006 Gene3D Kinesin motor domain 353 740 IPR036961 -
Lan16g1039 1006 Pfam Kinesin motor domain 418 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 MobiDBLite consensus disorder prediction 773 864 - -
Lan16g1039 1006 Coils Coil 747 774 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 208 232 - -
Lan16g1039 1006 SUPERFAMILY Calponin-homology domain, CH-domain 43 173 IPR036872 -
Lan16g1039 1006 CDD KISc_C_terminal 410 740 - -
Lan16g1039 1006 Gene3D - 33 163 IPR036872 -
Lan16g1039 1006 ProSiteProfiles Kinesin motor domain profile. 412 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
Lan16g1039 1006 MobiDBLite consensus disorder prediction 276 336 - -
Lan16g1039 1006 ProSitePatterns Kinesin motor domain signature. 638 649 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan16g1039 1006 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1003 - -
Lan16g1039 1006 Coils Coil 262 282 - -
Lan16g1039 1006 Coils Coil 299 319 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 848 862 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 949 1006 - -
Lan16g1039 1006 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 PRINTS Kinesin heavy chain signature 639 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 PRINTS Kinesin heavy chain signature 688 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g1039 1006 MobiDBLite consensus disorder prediction 975 991 - -
Lan16g1039 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 775 IPR027417 -
Lan16g1039 1006 Coils Coil 392 412 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 777 793 - -
Lan16g1039 1006 MobiDBLite consensus disorder prediction 308 336 - -
Lan16g1039 1006 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lan16g1039 1006 SMART kinesin_4 410 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1039 Lan-Chr16 17587757 17597635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1039 400 774 Calmodulin-binding Proteins AT5G65930 41.534 5.53e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1039 K10406 - gmx:100799535 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0904 4 11023248 11030950 Lan16g1039 16 17587757 17597635 LSH
Lan16g1039 16 17587757 17597635 Lan2g0272 2 2301709 2310078 LSH