Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1035 ATGGTAATGATGGATCTAAAAGACAAGGAATGGTTATGTTATGAGGAGGAGTTGAATGAAACTAAGAAATCTTGTACTCATTGCAAAACTACTAAAACACCACTTTGGAGAGCTGGACCAGCTGGACCTAAGACATTGTGCAATGCATGTGGAATCAGATATAGGAAGAAAAGGGATTCTATGGTGGGAATGAACAAAGGACATGAGAGGAAAAGAGAAAAATCAGAAAGAAAATTTGATGTTGGTGTTAACAAAGATTTGAACAAGTCCTTGAAAATGAAGTTAAATGCATTAGGAAAAGAGGTTTTGTTGCATCAATCAAACTCAATTGTGAAGAAACAAAGGAAGAACAGGTTAGGAGAGGAAGAACAAGCAGCTTTTTGTTTAATGGCATTGTCTTGTGGCTTTGTTTTTGCTTAA 420 0.3595 MVMMDLKDKEWLCYEEELNETKKSCTHCKTTKTPLWRAGPAGPKTLCNACGIRYRKKRDSMVGMNKGHERKREKSERKFDVGVNKDLNKSLKMKLNALGKEVLLHQSNSIVKKQRKNRLGEEEQAAFCLMALSCGFVFA* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1035 139 SMART GATA_3 19 74 IPR000679 GO:0006355|GO:0043565
Lan16g1035 139 ProSiteProfiles GATA-type zinc finger domain profile. 19 55 IPR000679 GO:0006355|GO:0043565
Lan16g1035 139 Pfam GATA zinc finger 25 58 IPR000679 GO:0006355|GO:0043565
Lan16g1035 139 CDD ZnF_GATA 24 72 IPR000679 GO:0006355|GO:0043565
Lan16g1035 139 ProSitePatterns GATA-type zinc finger domain. 25 50 IPR000679 GO:0006355|GO:0043565
Lan16g1035 139 Gene3D - 19 81 IPR013088 GO:0006355|GO:0008270
Lan16g1035 139 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 58 - -
Lan16g1035 139 PANTHER OS01G0976800 PROTEIN 3 139 - -
Lan16g1035 139 PANTHER GATA TRANSCRIPTION FACTOR 16 3 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1035 Lan-Chr16 17563299 17565327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1035 16 139 C2C2-Gata Transcription Factor Family AT3G06740 49.600 5.25e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan16g1035 GATA 1.2e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1035 - - lang:109330084 285.804