Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1034 ATGGATCGAGAAGGAGGAGGATCCAACGGTGGATCTTGTTACTACACTGTTCTCGGGATCCACAGAGATGCCTCCTCCTCTGATATTCGCACTGCGTATCGAAAACTCGCTATGAAGTGGCACCCTGATAAATCTGCAAGGAATCCTGCTACTGTTGGAGAAGCTAAGCGACGGTTTCAACAAATACAAGAAGCTTATTCAGTTCTTTCGGATGAATCGAAGAGGTTAACGTACGATGCGGGGCTTTATGATCCATTAGAGGAAGATAACCAAGAATTTTGTGATTTCATGCAAGAAATGATCTCAATGATGAACAATGTCAAAGACGAGGGGGACAGTTTAGAAGACCTACAAAGGATGTTCATGGATATTGTCGGTGGAGATGATATGAACTTTGAACTGAACCAGGATCGAACGGCTGGTAAGAGAGGACGTGTTGATGGATCAATGGGCACCGCATCTAAGCGCACCAACTCTTGCTGTTAG 486 0.4486 MDREGGGSNGGSCYYTVLGIHRDASSSDIRTAYRKLAMKWHPDKSARNPATVGEAKRRFQQIQEAYSVLSDESKRLTYDAGLYDPLEEDNQEFCDFMQEMISMMNNVKDEGDSLEDLQRMFMDIVGGDDMNFELNQDRTAGKRGRVDGSMGTASKRTNSCC* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1034 161 PANTHER PUTATIVE, EXPRESSED-RELATED 10 144 - -
Lan16g1034 161 MobiDBLite consensus disorder prediction 141 161 - -
Lan16g1034 161 PRINTS DnaJ domain signature 15 33 IPR001623 -
Lan16g1034 161 PRINTS DnaJ domain signature 33 48 IPR001623 -
Lan16g1034 161 PRINTS DnaJ domain signature 54 74 IPR001623 -
Lan16g1034 161 CDD DnaJ 13 71 IPR001623 -
Lan16g1034 161 PANTHER PUTATIVE, EXPRESSED-RELATED 10 144 - -
Lan16g1034 161 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Lan16g1034 161 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Lan16g1034 161 SUPERFAMILY Chaperone J-domain 13 85 IPR036869 -
Lan16g1034 161 Pfam DnaJ domain 14 79 IPR001623 -
Lan16g1034 161 Gene3D DnaJ domain 2 105 IPR036869 -
Lan16g1034 161 SMART dnaj_3 12 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1034 Lan-Chr16 17558154 17560250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1034 13 80 C2H2 Transcription Factor Family AT1G74250 43.478 1.99e-13 65.1