Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1033 ATGGTACCAAAAATACAATCTCAACAAGAGCATGAAGGTAGTAGTGGCAAAATTCCAATTCAGGAGTCAAAATGGAGTCATCATTTTGATACAAAACAAGCACAAATAATTGGACTTAGAAATGTAATAAACTTGCTATGCTTGAATGATCACAATTCATACTTGGAAACTTTCCTGAGAAGATTGGTAAGAGAAGCTGTGGAAAGCAAAATCCAGGATTATCAATTTCCAAGACCAAGGATTAATAATCAAGCTAGCATATCTGGAACAAAACTCTTCCAATTGTGTTTCATTAATAAGTTACCTGATAAAATTTTCAGCCTCTCTAATATCAAAGCAGAAGATAAATCACCTCTTCAAATTGCACTATTTGATGTTAATACTAAATCTATAGTCAATAATGGTCCACTATCTTCAATAAAGATAGAGATATGTGCCCTTAATGGTGATTTTGGAAGTGAAGATTGGACTGAAGTTGAATTCAATGCCAATATCTTGAAAGAAAGAAAGGGTAAAGGACTATTAGTTAATGGAGAAAGGTTTATTACTCTAAAAAATGGTGTTGGTTGTGTCACAAAAATTACTATAACTGATAATTCAAGATGGGTAAAGAGCAGAAAGTTCAGATTAGGTGCCAAAATTGTGAAATCAATTTCCATTGGGACAAATGTTAAGGAAGGTAGAAGTGAAGCTTTTGTGGTCAAAGATTCCAGAGGAGAATCATACAAGAAACACTACCCTCCGTCGTTGAAGGACGATGTATGGCGTTTGGAGAAAATTAGCAAAGGTGGAAAAATCCACGCGCGGCTCGCTCTCGATGGAATTCGCACTGTTAAGGATTTCTTGCAGTTATACACAATTAATCAATCCTTATTGCTTGAGAAGTTTGGCAAATTTTCGAAGAAGTCGTGGTTAGCGATTACTGCACATGCCAAGACATGTGTGATAGATGATTCAAATCTTTACAGTTACCAAACAGAAGAACCACCAATAGGGCTTGTATTCAATTCTATCTACAACCTTGTTGAAGTGACTTTTGATGGCCAAAACTATTTTTCACCAGATACTCTCACCCCTAATGATAAGATTGTGGTAGAATTAGTCAAGCAACATGCTTACAAAAATGTGAATAATTTGAAATCGATTGATGAGACTTCGTTAAGCTGCGTAAGACCCGCGGCATTTCTAAGAGCAAGTCGATCTGATGCTCCGGATCAAGTTTTGCCACAGATTAATATTTCAACAGCAGAAGATACATATCAACAAGAAACATGTGCAGATAATAATCAACCATTCATATCTGCTTCATATATTGATGAAGGAGCACATGATAACCAAACTTATGCTGATCCATTGCTAGACCAAAGAGAAATGCCACAAAATAGTTATGAAGAAAGTGATTTTTTCTCTAATTGGAACTTTCATGGATCATATATTCCACTTTTTGAAGGTGGTTTTTCAACAGAGAATGAAAGTTCTGATATTCAACTCATAAATGATTATCCTACTTATACAACATGGGTGCAAGAAAATGGCTTTTACTATGGTTCTTCTGATGGAGCTGAATTTAGTAGTCATTGTTCTTTTCTTAATTCTTCTATGGATATATCAAGCAGTGAGAAATCCAAAGCAGTGTGGCATAAGATTCTGACTGTTCTCAAATGTCTCATATCAATCAAAAGGGATGCATCTGCCAGAAGGAATGGAAATCTATTCTACTATAATTAA 1728 0.3519 MVPKIQSQQEHEGSSGKIPIQESKWSHHFDTKQAQIIGLRNVINLLCLNDHNSYLETFLRRLVREAVESKIQDYQFPRPRINNQASISGTKLFQLCFINKLPDKIFSLSNIKAEDKSPLQIALFDVNTKSIVNNGPLSSIKIEICALNGDFGSEDWTEVEFNANILKERKGKGLLVNGERFITLKNGVGCVTKITITDNSRWVKSRKFRLGAKIVKSISIGTNVKEGRSEAFVVKDSRGESYKKHYPPSLKDDVWRLEKISKGGKIHARLALDGIRTVKDFLQLYTINQSLLLEKFGKFSKKSWLAITAHAKTCVIDDSNLYSYQTEEPPIGLVFNSIYNLVEVTFDGQNYFSPDTLTPNDKIVVELVKQHAYKNVNNLKSIDETSLSCVRPAAFLRASRSDAPDQVLPQINISTAEDTYQQETCADNNQPFISASYIDEGAHDNQTYADPLLDQREMPQNSYEESDFFSNWNFHGSYIPLFEGGFSTENESSDIQLINDYPTYTTWVQENGFYYGSSDGAEFSSHCSFLNSSMDISSSEKSKAVWHKILTVLKCLISIKRDASARRNGNLFYYN* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1033 575 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
Lan16g1033 575 Pfam Calmodulin binding protein-like N-terminal domain 93 236 IPR046831 -
Lan16g1033 575 PANTHER OS02G0177800 PROTEIN 1 573 IPR012416 GO:0005516
Lan16g1033 575 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Lan16g1033 575 PANTHER CALMODULIN-BINDING PROTEIN 1 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1033 Lan-Chr16 17553003 17557215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1033 55 396 Calmodulin-binding Proteins AT5G26920 42.179 3.23e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1033 - - gmx:100805759 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1033 16 17553003 17557215 Lan2g0270 2 2264849 2268581 LSH