Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1032 ATGGAAATGGAGAAAAAACGTTCCAAGGGAAGCTTTTTCAGCTTGTTTGATTGGAATTCTAAATCTAGAAAAAAGCTGATCTGGAACAATCCTACTTTACCTGATGCTACGTTAATTGTAGAGGGTTCAAAGCAGGGAAAGGAAAATGTGGAAAACATGCCGAAGACACAGATTAGTAGGATTAAGGTGGATGAGAATGGAGCAAGTCCAAGTAACACTGGATGTTCGGATTTTAGCTGTGCCCTCTCAATTAGTAGTGATGAAGAATATGGAAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGATTCATTGCCAACTTCGGCAGTCACTGAGCTCTCCTCCACTTCACTATATGGCTCGAACTCTCATGGAGCTTCTCGTTGCGATGGGGATGCTCTTTATTCAGAGAATGACTTTCTTCCAGTGGAATATATAAATGTGCCACTTAAGGTGGAGAAGTCTTCTCGGGATGCAATGGAATCAGGGGCACACAAAGTGGGAAACTGGCAAATGAAGAGGTTCCAAACCGAAATGTTGCCTCCAAAGTCAGCTAAGACGATTCCGGTTACTCACAATAAATTGTTGTCACCTATCAAGAATCCTGGTTTTGTGTCCCCGAGGAATGCAGCTCACATAATGGAGGCATCTTGCAAAATAATTGAGGGAAGCCCTCGGCCATATACGAGAAACAAAATGTCGTCAGTTGGACCTTCATCTGCTCCCTTGAGAACTCGTGATTTAAAAGAGAGATTGGAAGCTTTACTAAATGCATCCGTGCCTGGAAAATCTGTGGGTCCGAGCACTGCCAACCTTTCAAATGGCAAGCCTAGCGATAGTAGCAGTAATTTATATAAACGCGCTCCGGCTTTCAAGGGTTCTAGAGTGTCAGAAAAAACTAGTTCTTGCAACTTAGCAAGTAAAGGAAAATCAGTTTCACAAGCAATACAAGCCCAAACCAATACTCAGAGCGGAGGTACATTGGCTTCAAATGGTAATAAGAATTACAGAAAGCAGAAAGAACGGACTCAGATAAAATCAAACCATTTCTCCAGGAATCAGAAACCAAGTACAGAACAAGTGATGCAGCAGAAAACTGGCACAAGCCGCAATGGCAACGTGCTTCGGAAGAATAATCAGAAACAGAATAGTTTAACCAACAAAGGTAAATCAACTTCAAAAATAGACTCCAATAAGCCAACAACACAAACTTCATCTTCAGAAAGTTCTACTGGAACAAGGAGGACGGTGAACAAGGGTGCTATAAATGGCAGTATTCAGTGTAAAAGGTCAAACTCTAGAGCAACTGTTAACCAAAAAGAGTTCCCATCTTCCGATAGCATTTCCCAGAAGAAAAGGGATATCAGTACGAGTATTCATGAGGCAAGGGGTCCGGATAAAGCGGTAAATAATTTGGAAAGTAAGTCCATAAAATGCAATATTACAACTGATGGAAGTATTGATCAGGATGATGCATTTAACATGAAAGAAAGCGAGGATGTTATTTCATTCACGTTTACATCTCCGTTGAGGAGAAGCATGCCTGGGTCTTTGTCCTCTGCTGAGCAAGTGGTGGGAAGTCGAAATATAATTGGTGTCGATTTTCTTGGGCGTAGTGATAACCTTTATCCCAAAAAATTATCATTATCTCCTCCACGGTTACCTATGATAGACGGTGATACTCTAAGTGACCTATTGGAGAAAAAGCTGCAAGAATTGACATCTAGAAGTAGTTTACCTCAATGTCCACTGGCCATAGAAGAGTCTTCGGCTGATTTGAGATCTACCGTGCAAGACAAAGTTCCCATTTTAGTAAACACCACATCCGAGGAACAAGATAGAAGCTTTCACCTTTACCTGTTTAGTGATAAACGGGATAGCATACATGGCTGTCATTCTTCAAATGATGATCCAGTATTTTACGTGAGTCAGCAACTGCAGACATCAGAAGTGATGGAAGATCCTAGCTGTAGCAGCTATAGTGAAAATGGAAATGATTCCGGTTGCAAGCATCCCAGAGCTGTCACAGTTTCCGAAAGTCCTTCTGCCAGTCAAAGTTACGTGGATAGTGAAGACGGTGCATATGGGAGCACGATTTATTCATCCATGCAAGATGAAGAAGTATCTAATTTTTCTGAGATAAGTGAATCTGTATCACTTGAAAATGAAGTCAGTTCAGGGCGAAGCTCTTCCATATGGCCAGTGGAAAATATGTCTGTGAAACAATTGAGTGAAATAACAAATTTGGCAGATTTTAAAAGATCGAGGGAAACCGGACTTGAATATGTACATGATATACTCACCAATGCAGAGTTTATGGCAGAAGAATTTGTCATCGGTCAAACCAATACTGTCATAATGCCAAATGTCTTTGATCGGTTGGTGAATGCGAGCAATGGAACAGAAGACTGTGAAGAGTATTCTATGCTTGAAATGAAGATTGTATTCGACTTTGTAAGTGAGTGCATAGAATTGAAATGTAAGCAAGCTTTTGTTGGAAGCTGTAAACAATGGTTTGGATTGATGAGGTCAATTAAAAGGAAGAACTGGTTAGCACAAGAGTTCTACAAGCAGATGCTAGGTTTTAGAAACACGGAAGAAGATGTAATGATCGATGAGCTTGTCAGCAATGACATGAGCACTGGCCGTGGGCGATGGCTCGAGTTCGATGTTGAAGCCTTTGAAGAGGGAATAGAGATTGAGGAGGACATACTAGATATTTTGATGGATGAATTGGTTTATGATTTGTTGCATGTTTAA 2766 0.4103 MEMEKKRSKGSFFSLFDWNSKSRKKLIWNNPTLPDATLIVEGSKQGKENVENMPKTQISRIKVDENGASPSNTGCSDFSCALSISSDEEYGSKAPGLVARLMGLDSLPTSAVTELSSTSLYGSNSHGASRCDGDALYSENDFLPVEYINVPLKVEKSSRDAMESGAHKVGNWQMKRFQTEMLPPKSAKTIPVTHNKLLSPIKNPGFVSPRNAAHIMEASCKIIEGSPRPYTRNKMSSVGPSSAPLRTRDLKERLEALLNASVPGKSVGPSTANLSNGKPSDSSSNLYKRAPAFKGSRVSEKTSSCNLASKGKSVSQAIQAQTNTQSGGTLASNGNKNYRKQKERTQIKSNHFSRNQKPSTEQVMQQKTGTSRNGNVLRKNNQKQNSLTNKGKSTSKIDSNKPTTQTSSSESSTGTRRTVNKGAINGSIQCKRSNSRATVNQKEFPSSDSISQKKRDISTSIHEARGPDKAVNNLESKSIKCNITTDGSIDQDDAFNMKESEDVISFTFTSPLRRSMPGSLSSAEQVVGSRNIIGVDFLGRSDNLYPKKLSLSPPRLPMIDGDTLSDLLEKKLQELTSRSSLPQCPLAIEESSADLRSTVQDKVPILVNTTSEEQDRSFHLYLFSDKRDSIHGCHSSNDDPVFYVSQQLQTSEVMEDPSCSSYSENGNDSGCKHPRAVTVSESPSASQSYVDSEDGAYGSTIYSSMQDEEVSNFSEISESVSLENEVSSGRSSSIWPVENMSVKQLSEITNLADFKRSRETGLEYVHDILTNAEFMAEEFVIGQTNTVIMPNVFDRLVNASNGTEDCEEYSMLEMKIVFDFVSECIELKCKQAFVGSCKQWFGLMRSIKRKNWLAQEFYKQMLGFRNTEEDVMIDELVSNDMSTGRGRWLEFDVEAFEEGIEIEEDILDILMDELVYDLLHV* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1032 921 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 921 - -
Lan16g1032 921 MobiDBLite consensus disorder prediction 656 692 - -
Lan16g1032 921 MobiDBLite consensus disorder prediction 264 289 - -
Lan16g1032 921 PANTHER DUF4378 DOMAIN PROTEIN 1 921 - -
Lan16g1032 921 MobiDBLite consensus disorder prediction 226 246 - -
Lan16g1032 921 Pfam Domain of unknown function (DUF4378) 762 913 IPR025486 -
Lan16g1032 921 Pfam DUF761-associated sequence motif 85 111 IPR032795 -
Lan16g1032 921 MobiDBLite consensus disorder prediction 297 336 - -
Lan16g1032 921 MobiDBLite consensus disorder prediction 351 454 - -
Lan16g1032 921 MobiDBLite consensus disorder prediction 260 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1032 Lan-Chr16 17524262 17528795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1032 3 919 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.439 6.83e-94 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1032 - - lang:109330253 1760.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0909 4 11083562 11088043 Lan16g1032 16 17524262 17528795 LSH
Lan16g1032 16 17524262 17528795 Lan20g0626 20 4939760 4943969 PCT
Lan20g0626 20 4939760 4943969 Lan16g1032 16 17524262 17528795 PCT