Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1026 ATGTTTCATGCATTGATGAATCTGTTCTCTGTGTGTTGGAAGCCATTTCGGCGCGGTACTGATGACACTGGAAGAGAAGGAAAAGAAGGATTGCTCTGGTTTCGCGATGTCGGAAAATATGGCTCCGGTGAATTTTCTATGGCGGTGGTTCAGGCCAATCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTAGGAACCTTCGTTGGAATTTACGACGGTCACGGCGGACCCGAGGCTGCAAGATACACCTGCGATCACTTGTTTCGCCATTTAGCAGCAATATCAGCTGAGTCACGCGGGATTGTGACAGCTGAGACTATTGAGAGGGCTTTCCACCAAACAGAGGACGGGTACACTGCCCACGTATCGGACTTATGGAGTACTCGACCTCAGATTGCAAATGCTGGGTCCTGTTGTCTAGTTGGTGTGATATTTCAGCAGACACTCTTTGTAGCAAACGTTGGAGATTCTCGTGTTGTGTTAGGTAGGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACCGAACATAATGCAAGTCTGGAGGAAATTAGACATGAACTTAAAGAATTACACCCTGATGATCCCCAAATTGTTGTCCTTAAGCATGGAGTGTGGAGGGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACAAGCGCAGTTTAACCGGGAACCACTTGCTGCCAAATTCAGACTCCCTGAACCGATGAACATGCCTTACATGACTGCTAATCCCACTATTCTTTCTCACCGTCTTCAGCCAAATGATTCCTTTCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTCAACAGCAATCCGCATGCGGGTAGTGCCAAGAGACTTATTAAAGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTTCGTAAGATTGACAAGAAGGTTCGGCGCCATTTTCATGATGATATATCTGTTATAGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCACAGTGCTAAATTCGCCACTCTCAATTCGAAGTGCTCTTGATCACTGA 1107 0.4544 MFHALMNLFSVCWKPFRRGTDDTGREGKEGLLWFRDVGKYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPEAARYTCDHLFRHLAAISAESRGIVTAETIERAFHQTEDGYTAHVSDLWSTRPQIANAGSCCLVGVIFQQTLFVANVGDSRVVLGRKVGNTGGMAAIQLSTEHNASLEEIRHELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKQAQFNREPLAAKFRLPEPMNMPYMTANPTILSHRLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLNSPLSIRSALDH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1026 368 Gene3D - 35 353 IPR036457 -
Lan16g1026 368 Pfam Protein phosphatase 2C 68 315 IPR001932 -
Lan16g1026 368 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Lan16g1026 368 SUPERFAMILY PP2C-like 53 346 IPR036457 -
Lan16g1026 368 SMART PP2C_4 31 343 IPR001932 -
Lan16g1026 368 ProSiteProfiles PPM-type phosphatase domain profile. 41 345 IPR001932 -
Lan16g1026 368 CDD PP2Cc 45 345 IPR001932 -
Lan16g1026 368 PANTHER ALPHABET, ISOFORM E-RELATED 3 368 - -
Lan16g1026 368 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1026 Lan-Chr16 17472544 17476901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1026 1 365 PP2C-type Phosphatase Gene Family AT4G38520 58.311 1.66e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1026 K01102 - gmx:100811922 649.818