Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1022 ATGGAGGAGAAGAGAGAACCCAACCCAATGGCAAATTCTGTAGCAGCAGCAACATTTTCTGATGAGATTCCAAACATGAACATGATCAACAACACTTTTATTTTCCCTTTCTCATCCAACACCAGCATCTTTGATATTATGCCACCAGCACCATCATGTGATAAAAAACCTTCTTCTTCAACCTTTGGTGGTGGCTTCATGGATTTACTCGCTGTCAATGATTACAACCCTTTCTTATTCGATTGCATACCCACCACCACCACTACCCAAATCAACGATCACCAGCTTCACCACCCTCTTCCGTCACCTGCCGATGGTTCTGAGGTGTTGAACATTCCGGCCTCCCCTAACTCTACTTCAATCTCGTCATCGTCCAATGAAGCTGCCACCGCCACCGCCGCCACCACAACCAGCAACTTCAACGAGAATCTGAGTGGTAAAGTAGGGAATGATGAATATGAAGAAGCAGAGGATGAAGATGGTAATGGAGGCAGAGGAGATGACATAGACAAGACTAAGAAACAGCTGAAACCAAAAAAGAAGAACCAAAGGAAGCAAAGAGAGCCAAGATTTGCGTTCAAGACAAAGAGTGAAGTAGATCAACTAGACGATGGTTATAGGTGGCGCAAGTACGGTCAAAAGGCTGTGAAAAACAGCCCTTATCCGAGGAGCTATTACCGTTGCACCACAGCAGGTTGTGGCGTTAAGAAGCGGGTGGAGCGCTCTTCTGAGGACCCTACCACCGTAGTCACCACTTACGAAGGCCAGCACACTCACCCTTGTCCCGCCACATCACGTGCTTCATTTGGCTTCATGCAATATGGTAATGGTGGTGCTCTTAGTTCCCAACACTTTATGCTTCCACATAATCAACAGCAGTTTCATCAAGCTTTGTCATATGAATCAACCCCACCTTTGAATTTGAACTCTACTAGTGACTATGTGAATTCGTCATCGTTTAGTAGCTTCTTCCAAGATCAAGAGAACCATCAACAACATTTTGTACCATCTAGGACAAGGACTACGTTGTTGAGGGACAATGGACTTCTTCAAGATATTGTACCAACGCAAATGATGAATGCAAAAAAGCAAGATGAGTAG 1101 0.4487 MEEKREPNPMANSVAAATFSDEIPNMNMINNTFIFPFSSNTSIFDIMPPAPSCDKKPSSSTFGGGFMDLLAVNDYNPFLFDCIPTTTTTQINDHQLHHPLPSPADGSEVLNIPASPNSTSISSSSNEAATATAATTTSNFNENLSGKVGNDEYEEAEDEDGNGGRGDDIDKTKKQLKPKKKNQRKQREPRFAFKTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDPTTVVTTYEGQHTHPCPATSRASFGFMQYGNGGALSSQHFMLPHNQQQFHQALSYESTPPLNLNSTSDYVNSSSFSSFFQDQENHQQHFVPSRTRTTLLRDNGLLQDIVPTQMMNAKKQDE* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1022 366 MobiDBLite consensus disorder prediction 111 146 - -
Lan16g1022 366 ProSiteProfiles WRKY domain profile. 197 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g1022 366 MobiDBLite consensus disorder prediction 93 193 - -
Lan16g1022 366 SMART WRKY_cls 202 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g1022 366 Pfam WRKY DNA -binding domain 203 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g1022 366 Gene3D WRKY domain 180 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g1022 366 SUPERFAMILY WRKY DNA-binding domain 195 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g1022 366 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 65 356 - -
Lan16g1022 366 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 356 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1022 Lan-Chr16 17399312 17401185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g1022 172 359 WRKY Transcription Factor Family AT2G47260 52.217 8.11e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g1022 WRKY 8.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1022 - - gsj:114394278 320.087