Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0999 ATGGCATCTGATCTAAATTTGTGGTTGTCCAAGAAAACATCTGTTTTCGGGTTGGAAGTGTGGGAGTTAATAGGGTTAATAGTTGGGATGTTCATCATAGTCATTCTTGTGGTGGTATCAATATGTCTTTCATCAAGAAAGAAATCTAAAAGAGTCAAGGGCATGCTTCCCCTTGGCCAAATGTTATCTGTTACAGAAGATATAAAAGAGATTAGAGTCGATCAAAGTTCGGGAAATAATCATCCCCAAAATGGCGCTTTTATGAGTCTGTGTGACACATTTAGTGACAAGGAGTCTGAAAAGGTTTTTACCCAAGCAAAAAATGGGGATAATAGCAGCCGATCAGGCTCATTTGTCCATGTTGAGAAAGATGCTGGTGGCTCTCAATCAGGTGAAGAAAGCGGTGAGAAGTCTCTTTATAGGTCTTCTTCACATCCTATAACCGCACCATCCCCTTTGTCCGGTCTGCCTGAATTCTCTCAGCTTGGCTGGGGGCACTGGTTTACATTAAGGGACCTAGAAGTTGCAACAAACAGGTTTTCAAAAGAAAATATTATCGGTGAAGGTGGATATGGAGTCGTTTATCGTGGTCAGCTAGTCAATGGTAATCCTGTAGCTGTTAAGAAGCTCCTTAATAATCTAGGACAAGCTGAAAAGGAATTTAGGGTGGAAGTTGAAGCTATTGGTCATGTGCGGCACAAGAACTTGGTCAGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGACCAATGGCTTCATGGGGCCATGCGGCAGTATGGCTTTCTTACTTGGGATGCTCGGATTAAAATTCTCCTTGGAACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGACATTAAGTCAAGCAATATTCTAATTGACGATGATTTCAATGCCAAAATATCTGACTTTGGGTTGGCTAAGCTACTGGGTGCTGGAAAAAGTCATATTACTACTAGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTACTTAATGAGAAGAGTGATGTTTATAGTTTTGGAGTATTGCTTCTTGAAGCAATTACTGGAAGAGATCCAGTAGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGATTGGCTCAAGATGATGGTAGGGAATAGGCATGCAGAAGAGGTTGTGGACCCCAACATTGAGACCAGGCCGTCAACAAGTTCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCATGTTCTGAAAAAAGACCAACGATGAGTCAAGTGGTCCGCATGCTTGAATCAGAGGAATATCCCGTACCTCGAGAGGATAGAAGACGCCGAAAGAGTCAGGCAGAAAATATAGAGATGGAGGCGCCGGAGACTTCAGATACAGATAAGAGTTGTAAGCCAAATTCTAAACCCAATGGCAGAAAGAACCAACCGAAGTAG 1506 0.4243 MASDLNLWLSKKTSVFGLEVWELIGLIVGMFIIVILVVVSICLSSRKKSKRVKGMLPLGQMLSVTEDIKEIRVDQSSGNNHPQNGAFMSLCDTFSDKESEKVFTQAKNGDNSSRSGSFVHVEKDAGGSQSGEESGEKSLYRSSSHPITAPSPLSGLPEFSQLGWGHWFTLRDLEVATNRFSKENIIGEGGYGVVYRGQLVNGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLDQWLHGAMRQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGNRHAEEVVDPNIETRPSTSSLKRALLTALRCVDPCSEKRPTMSQVVRMLESEEYPVPREDRRRRKSQAENIEMEAPETSDTDKSCKPNSKPNGRKNQPK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0999 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Lan16g0999 501 Gene3D Transferase(Phosphotransferase) domain 1 256 469 - -
Lan16g0999 501 Pfam Protein kinase domain 181 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0999 501 MobiDBLite consensus disorder prediction 454 491 - -
Lan16g0999 501 ProSitePatterns Protein kinases ATP-binding region signature. 186 209 IPR017441 GO:0005524
Lan16g0999 501 MobiDBLite consensus disorder prediction 102 147 - -
Lan16g0999 501 MobiDBLite consensus disorder prediction 450 501 - -
Lan16g0999 501 Gene3D Phosphorylase Kinase; domain 1 160 255 - -
Lan16g0999 501 CDD STKc_IRAK 186 452 - -
Lan16g0999 501 SUPERFAMILY Protein kinase-like (PK-like) 164 462 IPR011009 -
Lan16g0999 501 PANTHER OS01G0323000 PROTEIN 2 501 - -
Lan16g0999 501 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Lan16g0999 501 SMART serkin_6 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0999 501 MobiDBLite consensus disorder prediction 131 147 - -
Lan16g0999 501 ProSiteProfiles Protein kinase domain profile. 180 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0999 Lan-Chr16 17126589 17131567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0999 113 454 Trihelix Transcription Factor Family AT1G70460 46.974 6.48e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan16g0999 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0999 - - gmx:100793499 858.211