Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0986 ATGGTTGTTTTTGCTGCACAAGTTCCTGTTATAGAGAGTAGTGGTGACAGTAATGTTGATGGAACTAGTGGTAACATGGGTGATGATGCCTCAGTCTTGCATTCCTTTGCTAACTGGTCAATGCCTGCATCCGGACTGAATGCACATAGTCCTAGTACAACTCAGTTTACCATATTCTATAATGGGAATATCTGTGTCTATGAAGGAATTCCTGCTGAAAAGGTACGTGAAATTATGCTTATTGCTGGTGCCTCTGCCAAGTCTGCTGAAGTGAAGAAAGGGACCCCTTTCACTTCATTCATTCCCACAGATCCCTCTTCTCCGGACGGAAACTCTAACAATCTGCCTTCACAGCAATCAGTATGCTTTCCGGCTCAGAAGAATCCCATTTGCAGGCTGCAAGAATTTCCGATAGCACGCAGACAGTCACTTCAAAGGTTTCTTGAGAAGCGAAGAGACAGGTTGGGTAGCAAAGTCCCTTATGCCTCATCAACAATAAAAGCTGCTGATGAAAACAACTTTTGTGCTGATAATAATGCACCAAATGAGGGATATCAGTCAACAGTTGCTGCCTCTTGA 579 0.437 MVVFAAQVPVIESSGDSNVDGTSGNMGDDASVLHSFANWSMPASGLNAHSPSTTQFTIFYNGNICVYEGIPAEKVREIMLIAGASAKSAEVKKGTPFTSFIPTDPSSPDGNSNNLPSQQSVCFPAQKNPICRLQEFPIARRQSLQRFLEKRRDRLGSKVPYASSTIKAADENNFCADNNAPNEGYQSTVAAS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0986 192 SMART tify_2 49 84 IPR010399 -
Lan16g0986 192 MobiDBLite consensus disorder prediction 99 119 - -
Lan16g0986 192 Pfam tify domain 50 83 IPR010399 -
Lan16g0986 192 MobiDBLite consensus disorder prediction 97 119 - -
Lan16g0986 192 PANTHER DIVERGENT CCT MOTIF PROTEIN 17 176 - -
Lan16g0986 192 ProSiteProfiles Tify domain profile. 49 84 IPR010399 -
Lan16g0986 192 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 176 IPR040390 -
Lan16g0986 192 Pfam Jas motif 137 161 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0986 Lan-Chr16 16968616 16982425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0986 15 170 Tify Gene Family AT5G20900 37.952 9.25e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan16g0986 tify 3.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0986 K13464 - gmx:100306045 178.718