Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0978 ATGTCTTTGCAACCAAACTTCGAATCAACGAATTCAGATACGTTGCATGAATCCAATCACAAAAGGCGTCGCAAAATCGAAGACCACGATTCCATAACTCACATTCCATGGAGATCCGAAACAGTACAGAGAATCTACACCTCCAAGCTCACCTATCATCTCCGCCACGTTCTTCGCCGGATTCCACCATCAGCGGCTGCCAAACCAATTTCCGGCCGTGAAGTTCGCGTTACCGGCGATCAATTTCTGGCAGCGATGGCGAAGGGAAGAACTCGTTGGAGCCGAGCGATTCTGACGAGTCGACTCAGAAGATGGAATATGAATTACAATAAGGTGAAAAAACTGACGAAGGGATTGGTGAAGAGAAAACCGGAGATTCGGAGAAGGTTACCGGTAAGTCAGAAGAAAGTGCGTGTTCTCAGCCGGTTAGTTCCAGGTTGCCGGGAAGTTTCGTTTCCGAATCTTCTAGAAGAAGCAATGGATTATATATCGGCGTTGGAAATGCAAGTGCGAGCCATGACGGCGCTAGCTGAGGTACTCGCCGGTGGTGCGCCGCCGGAAAATACACCGTGA 573 0.4921 MSLQPNFESTNSDTLHESNHKRRRKIEDHDSITHIPWRSETVQRIYTSKLTYHLRHVLRRIPPSAAAKPISGREVRVTGDQFLAAMAKGRTRWSRAILTSRLRRWNMNYNKVKKLTKGLVKRKPEIRRRLPVSQKKVRVLSRLVPGCREVSFPNLLEEAMDYISALEMQVRAMTALAEVLAGGAPPENTP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0978 190 PANTHER TRANSCRIPTION FACTOR BHLH149 15 183 - -
Lan16g0978 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 183 IPR044660 GO:0006355
Lan16g0978 190 MobiDBLite consensus disorder prediction 1 27 - -
Lan16g0978 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 183 IPR036638 GO:0046983
Lan16g0978 190 CDD bHLH_AtIBH1_like 127 177 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0978 Lan-Chr16 16854545 16855378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0978 37 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 51.034 5.03e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0978 - - aprc:113873135 197.593