Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0967 ATGAACTATAGATGGACCAATGGTAGGCATGAAACTGGTGGCCATGACAGGAAGCAATCTAAAAAGGATCAGGCATATCAGGACTCCCTTATTGATGATTTTTCGGAGGATTTTCGTTTGCCAATCAATCACAGGCCAACAGAAAATGTTGATCTGGAAAATGTAGAACAAGCATCTTTGGACACACAGTTATCATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGTTGGAAAGGAAAGGGTCTTGGGAAGGATGAGCAAGGAATCACCGAGCCAATAAAATCTGGGATCAGGGATCCAAGATTGGGGGTTGGTAAACAAGAAGAAGACGATTTTTTCACCGCAGAGGAAAATGTCCAGCGAAAAAAACTTGAAATTGAGTTGGAGGAGACAGAGGAGCATGTGAAGAAGCGGGAGGTATTAGCTGAACGTGAGCAAAAAATTCAAACCGAGGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCAATGGAGTTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAGATGCATGGTAGTAGTAGCCGGGATGATAGACAAAAGCGAGAACAGCAGCGTCAAGAGAGAGAAATGGCTAAGTTCGCTCAAATTGCTGATGCTCAAAAGCAGCAACAACTTCAACTCCAGCAAGAGTCTGGATCTGCACCTGTTTCCTCTGAATCTAAAACAGCTACCGCACTTACGGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTTCTAAAAGCAGCGTTTCCAAGATCTCTTTTGGTGCCAAGAAGCATAATGTTGCAAAGAAGGAAAAGGTTCCTATATCCTCAGTATTCGGCAATGATAGCGACGAAGAATAG 915 0.4219 MNYRWTNGRHETGGHDRKQSKKDQAYQDSLIDDFSEDFRLPINHRPTENVDLENVEQASLDTQLSSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLEIELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQQLQLQQESGSAPVSSESKTATALTDQEQRNTLKFGFSSKSSVSKISFGAKKHNVAKKEKVPISSVFGNDSDEE* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0967 304 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Lan16g0967 304 MobiDBLite consensus disorder prediction 9 28 - -
Lan16g0967 304 MobiDBLite consensus disorder prediction 192 222 - -
Lan16g0967 304 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Lan16g0967 304 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Lan16g0967 304 MobiDBLite consensus disorder prediction 1 28 - -
Lan16g0967 304 MobiDBLite consensus disorder prediction 225 260 - -
Lan16g0967 304 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 304 - -
Lan16g0967 304 SUPERFAMILY beta-beta-alpha zinc fingers 149 189 IPR036236 -
Lan16g0967 304 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Lan16g0967 304 SMART G-patch_5 64 109 IPR000467 GO:0003676
Lan16g0967 304 MobiDBLite consensus disorder prediction 192 260 - -
Lan16g0967 304 MobiDBLite consensus disorder prediction 280 304 - -
Lan16g0967 304 Coils Coil 116 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0967 Lan-Chr16 16736666 16740251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0967 1 304 C2H2 Transcription Factor Family AT5G26610 65.798 1.15e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0967 - - gmx:100793206 481.485