Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0958 ATGGAAAAGCTGATTCTTGTGATACTCATCTTACCCTTTGTTATCTCTGCTAGATCTGAGACTATAAACACAACACACTCTCTCTTCTCTTTCTTTCAAAACGACGCCGTTCAACCTCAGCCACTCACCATTCCTCTCACTCTTATTCAATCTGCTGCTTCCAAAGGAGCTGTTTGTTTAGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATCTGCATCTGGTGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGGTGGTGTAATACCATACGAAGTTGTGTATTTAGGAAAACTACTCGTCGCGGTTCCTCAAAGTTCATGGAAAAACAACTACCATTCACAGGGATATTGAGCAACAAAGCTGAAGAAAACCCCGATTTCTTTAACTGGAATAGAATCAAAGTACGATACTGTGATGGAGCATCTTTCAGCGGAGATAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGACGAATTAATGTCCAAGGGAATGAACAAAGCCAACCAGGCCCTTCTCTCTGGATGCTCTGCAGGCGGTGTAGCATCTATAATACATTGTGACGAGTTCCGGAACTTGTTTCCACAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTCCTTGATGCAGTTGATGTATCTGGGGGGCGCCCACTGAGGAATCTGTTCGGAGGTGTAGTTAACTTGCAGGGAGTGCAAAAAAATCTACCACAAAGCTGTCTTAGCAAACTTGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGATCAATCATGTTCAGACTCCGTTGTTTCTACTCAATGCAGCGTATGATGCATGGCAGGTTCAAGAAAGTTTAGCCCCACCTTCAGCTGATCCCCATGGCTCTTGGAATGAATGTAAATCGAATCACGCAAAATGTAACTCATCTCAAATTCAGTTCCTCCAAGATTTCAGAAATCAAATGCTAAATGACGTGAAAGGCTTCTCATCGTCATCTCAAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACGTGGTTTGCTGATGACTCTCCGCTTATCAACAATAAGCCGGTAGCAATTGCTGTTGGAGACTGGTATTTTGATCGACAAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACACCACCTGTCATAATTTGGTCTTCAATGTTGGTAGATCTGTAATAGTAGACTCCAACTCTCAGCCTTCAAGTGATGAATCATTTAGCATGATATATTCCCACTCCACAAAGTTGACTTATACAAGCCTATATATGCTAAGTGCTTTGTTGTCAATTACATGTTCCTTGTGA 1365 0.4198 MEKLILVILILPFVISARSETINTTHSLFSFFQNDAVQPQPLTIPLTLIQSAASKGAVCLDGTLPGYHFHPGSASGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKFMEKQLPFTGILSNKAEENPDFFNWNRIKVRYCDGASFSGDSENESAQLQFRGQKIWLAAMDELMSKGMNKANQALLSGCSAGGVASIIHCDEFRNLFPQSTKVKCLSDAGFFLDAVDVSGGRPLRNLFGGVVNLQGVQKNLPQSCLSKLDPTSCFFPQNLINHVQTPLFLLNAAYDAWQVQESLAPPSADPHGSWNECKSNHAKCNSSQIQFLQDFRNQMLNDVKGFSSSSQTGLFINSCFAHCQSERQDTWFADDSPLINNKPVAIAVGDWYFDRQAVKAIDCAYPCDTTCHNLVFNVGRSVIVDSNSQPSSDESFSMIYSHSTKLTYTSLYMLSALLSITCSL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0958 454 Pfam Pectinacetylesterase 38 387 IPR004963 GO:0016787
Lan16g0958 454 PANTHER PECTIN ACETYLESTERASE 2 422 - -
Lan16g0958 454 PANTHER NOTUM-RELATED 2 422 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0958 Lan-Chr16 16648381 16654025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0958 33 406 Carbohydrate Esterase AT1G57590 72.000 0.0 601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0958 16 16648381 16654025 Lan20g0572 20 4400376 4407875 PCT
Lan20g0572 20 4400376 4407875 Lan16g0958 16 16648381 16654025 PCT