Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0953 ATGACCTACCACATGGAGAACCGACACCACCACCATGAATCAACCATCTTAAGTTCTAGCCGCAACATAGATCCTATAATCAAAGAAATGGATTTCTTTGCATCAAATAACAACAACAACAACACTAATGATAGTTTTAATGATGATAATCATCATCATAAGAAGCAACATAATCAAGATCAAGATGAATCATCAACTCTCCTTATTGATCATCATCATCATGTAAATACCGGGTTGTATTTAACGTGTGCAAGTGCTGGAATATCAAAACCAAGTAATAGTGAAAATCATCAAACTGAGATGATTAAACTTGAAAGAGAATTACGAAGAGTACAAGAAGAGAATCACATGTTGAAAACTACACTGGATCAGATCAGTAAAAGCTATAGCCAACTACAAGTTCAGTTGTTCATCTCTTTGCAGAATCAAAAGCCTCATCAGGTTAGTGGTGATCCTCATGCATTAGAAGATAGGTCATCCTCACAAAGTTGGGTCTCATCCTCATCCAAGAGTCCTAAGATAGAAGAAGAAGCCAAAACTGAAGAACAAGTTGTTGCCGATCAGCTTCCTTTCAGAAAAGCTAGGGTTTCTGTACGAGCAAGATCAGAAGCTAGTATGATTAGTGATGGATGTCAATGGAGGAAATATGGCCAAAAAATGGCAAAGGGCAATCCTTGTCCTCGTGCTTACTATCGTTGTACTATGGCTGTAGGATGTCTTGTCCGTAAGCAGGTACAAAGATGTGCACAGGACAAGACAGTGCTCATAACAACATATGAAGGAAATCACAACCATCCTCTTCCACCAGTAGCAACAGCCATGGCCAATACAACTTCAGCAGCAGCATCAATGCTTCTCTCAGGTTCAACACACACCAATCAATCACTAACAACCTCTTCAGGTTCATATTTCTCATCAATGGCAACCCTATCAGCTTCAGCACCATTTCCAACCATAACCCTAGACTTAACACAAAACCCTAACAACAACAACAACAACAACATGCAACAACTTCAACCAAGATTCTACCCTCTTGCATTGCAGCATGCAGGTTCTCATGGTGGGTCCTACCTTCTAGGGCAACCCTTATTCTTGTCACAAAAGATGGTGCATAATTCTTCAGCTATGCCCTTAGTTCAACTAGGGCAAAGAAATAATTCATCATCTGTGGTTGAAACTGTGAGTGCAGCAATTGCTTCTGATCCTAATTTCACTGCAGCTTTGGCTGGAGCAATCTCATCAATCATTGGAAGAGGTGGAAATAGTAATAATATTATAAGTAACAATGGAAGTGGTGGTGCTGTGTTACCAGAATCACAGTCATGCACAACATTCTCCAAAAACTAG 1347 0.3987 MTYHMENRHHHHESTILSSSRNIDPIIKEMDFFASNNNNNNTNDSFNDDNHHHKKQHNQDQDESSTLLIDHHHHVNTGLYLTCASAGISKPSNSENHQTEMIKLERELRRVQEENHMLKTTLDQISKSYSQLQVQLFISLQNQKPHQVSGDPHALEDRSSSQSWVSSSSKSPKIEEEAKTEEQVVADQLPFRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCLVRKQVQRCAQDKTVLITTYEGNHNHPLPPVATAMANTTSAAASMLLSGSTHTNQSLTTSSGSYFSSMATLSASAPFPTITLDLTQNPNNNNNNNMQQLQPRFYPLALQHAGSHGGSYLLGQPLFLSQKMVHNSSAMPLVQLGQRNNSSSVVETVSAAIASDPNFTAALAGAISSIIGRGGNSNNIISNNGSGGAVLPESQSCTTFSKN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0953 448 MobiDBLite consensus disorder prediction 145 181 - -
Lan16g0953 448 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0953 448 Pfam WRKY DNA -binding domain 209 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0953 448 Gene3D WRKY domain 191 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0953 448 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 157 446 - -
Lan16g0953 448 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 23 147 - -
Lan16g0953 448 Coils Coil 94 121 - -
Lan16g0953 448 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 147 IPR044810 GO:0003700
Lan16g0953 448 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 157 446 IPR044810 GO:0003700
Lan16g0953 448 MobiDBLite consensus disorder prediction 46 64 - -
Lan16g0953 448 MobiDBLite consensus disorder prediction 34 64 - -
Lan16g0953 448 SUPERFAMILY WRKY DNA-binding domain 200 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0953 448 MobiDBLite consensus disorder prediction 145 171 - -
Lan16g0953 448 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0953 Lan-Chr16 16590842 16596591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0953 87 416 WRKY Transcription Factor Family AT4G04450 42.857 2.20e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0953 WRKY 2.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0953 - - lang:109329451 752.666