Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0950 ATGGATTCTGAGAATGGTGAAGAACATAAGCATGAAGAAACAAGTGCACCAGAGAATCCTTCAGAGACAAACACAAATGGTGAAAATAGTAAACAAAAAGAAAAAGCTGAAACAGTTCCATATTTCAGGTTATTTTCATTTGCAGACTCTACTGATATTATGTTAATGGTTGTTGGAACCATTGGGGCCATGGGAAATGGTATAGCAATGCCAATCATGACAATACTTCTTGGACAAGTTATTAATACATTTGGAAGTAACCAGACTAACAATGCCAACGTTGTCGACGATGTTTCCAAGATTTGTCTAAAGTTTGTATACTTGGCAATGGGCACTGGTGTGGCAGCATTCCTACAGGTGTCTAGTTGGATGGCCACAGGGGAAAGACAAGCTGCAAGAATAAGAGGCATGTATTTGAAAGCTATACTAAGACAAGACATTAGTTTCTTCGATATGGAAACTAACACCGGCGAGGTTATAGGGCGAATGTCGGGTGACACAGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGAAAGTTTCTGCAGCTAATGTCAGCATTCATTGGAGGATTTGTGATAGCTTTTGTCAGAGGGTGGCTTCTTACTCTTGTCTTGATGTCCACTATTCCACTTCTAGTAGTTTCCGGCGCTACTATGGCGCTTGCCATAGGAAAGACATCATCAAGAGGTCAAAAAGCTTATGCAAAAGCCGCAAATCTAGTTGAACAGACAATTGGCTCGATCAGAACTGTTGCATCATTTACTGGTGAAAAGCAAGCAGTATCTAGTTACAGCACATTTCTTGAAGATTCTTACAAATCAGGAGTTCAAGAAGGTTTCGTAGCCGGAACAGGTCTTGGCACGATTATGTTCTTTATTTTCTGCCTTTATGCTTTGGCTGTCTGGTATGGCGCAAAATTGATCATGGAAAACGGATATAATGGTGGTAGGGTGATCAATGTGATTATCGCTGTGTTAACTGCTTCCATGTCTCTTGGCCAGGCATCCCCTTCCATGAGTGCTTTTGCTGCAGGTCAAGCAGCAGCTTATAAAATGTTTCAAACAATTGAGAGGAAGCCGAATATCGATGCTTATGACCCAAACGGAAAAACTATAGAGGATATTCACGGTGAAATAGAGTTAAGGGATGTTTATTTCAGTTATCCAGCTAGACCTGAGGAATTGATATTCGATGGTTTCTCTCTTCAAATATCTAGTGGTTCCACTACAGCATTAGTCGGACAAAGTGGAAGTGGCAAGTCTACGGTCATCAGTTTGATAGAAAGATTCTACGATCCACGGGCAGGTGAAGTTCTTATCGATGGCATTAACGTGAAAGAATTTCAGATTCGATGGATCAGAGGAAAAATTGGCCTTGTCAGCCAAGAGCCGGTGCTGTTTGCATCCAGCATTAAGGATAATATTGCATATGGAAAAGAGGGAGCAACAGTTGAAGAGATAAGAGCTGCAGCTGAACTTGCCAATGCCGCAAAATTCATTGATAAATTGCCGCAGGGTTTGGACACAATGGTTGGTGAGCATGGAACTCAGCTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCCAGAGCAATCCTGAAAGATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAAAGGGTGGTGCAAGAAGCTCTAGACAGGATCATGGTCAACAGAACCACTGTTGTTGTAGCACATCGCTTGAGCACGGTGAGGAATGCCGATATGATAGCTGTTATCCAAAGCGGGAAAATGGTTGAAAAAGGAACACACATAGAACTACTCAAGAATCCTGGTGGAGCTTACTCTCAACTTATACGGTTACAAGAAGAAAGGAATGAATCAGGAGAAAGTGCAGACCATCAAAACAAGAGAGAACTTTCCTCAGGATCCCTTAAACATTCGAGTCGACCAGGGTCACTTAGAAGATCAGGATCATCTGTGGGGAATAGTAGCAGCCACTCTTTTTCAGCTCCGTTTAGTTTACCAACAGGAGTTAACATCCCTGGTCCTGAATCTGAACATTCAGAAACCAAAGAAAAACCAGGAAAGGTTCCAATCGGACGCCTTGCTGCGCTCAACAAGCCCGAGATTCCAGTGCTTCTGATTGGATGTGTAGGTTCCATAGCAAATGGTGCTATATTTCCAGTATTTGGCTTGTTGCTTTCTAGTGTTATCAAAATATTTTATGAACCATTTCATGAGCTGAAAAAGGATTCCAAATTTTGGTCACTAATGTTTGTGGCCCTTGGACTTGCATCATTAGTGGCAATTCCAACCCGAATGCACTTTTTCTCTGTCGCTGGAAGTAAGCTAATCCAACGAATAAGGCTAATTTGTTACGAAAAGGTGATCAACATGGAGGTTGGTTGGTTTGATGAACCTGAGAACTCAAGTGGTGCAATTGGTGCGAGGCTCTCAACCGATGCTGCACTCGTACGTGCCCTTGTTGGTGATGCACTCGGACTATTGGTTGAAAATATAGCAACGGCTTTGACAGGTTTGATTATTGCTTTCACCGCGAGCTGGCAGTTGGCGTTTATTGTTGTTGTCTTCATTCCCTTCATTGGACTCAACGGATATATTCAAATTAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATAATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTTTGTTCTGAAGAGAAGGTTATGGAACTATACAGGAAGAAATGTGAAGGTCCCATGAAAGCGGGGATTCGACAAGGCTTGATCAGTGGAACAGGATTTGGAGTTTCATTTTTCTTACTATTTTGTGTCAATGCACTATGCTACTATGTTGGAGCGAGATTCGTGGATGCTGGAAAGGCAACATTCTCAGATGTTTTTCGGGTTATCTTAGCTTTAACTTTTACAGCTAACGGAATTTCCCAATCAAGTTCCCTTGCTCCTGATTCTAGCAAAGCCAAGTCAGCTATTGTGTCGATTTTCGGAATAATCGATAGGAAGTCTAAGATAGATCCAAGTAATGAGTCCGGTACAACGCTTGATAGCATAAAGGGAGAAATTGAGCTTCGTCATGTAAGCTTTAAGTATTCATCTAGGCCTGATATTCCGATTTTTCGAGACCTTAGCTTGACTATCCATTCTGGCATGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTTCCTTGTTACAAAGATTTTATGACCCTGATTCTGGTCACATTACATTTGATGGGGTAGATATTCAGAATTTACAGCTCAAATGGTTAAGGCAACAAATGGGACTTGTTAGCCAAGAACCAGTATTGTTCAATGACACTATTCGAGCCAATATTGCATATGGAAAAGAAGGCATTGCTACTGAAGCAGAAATTATAGCTGCAGCAGAATTGGCCAATGCCCATAATTTTATTAGTGGATTACAGCAGGGTTATGATGCTATAGTTGGAGAGAGGGGAATACAATTATCTGGTGGACAAAAACAAAGGGTAGCCATTGCACGTGCTATAATCAAAAGTCCAAAGATATTGCTACTAGATGAAGCTACAAGTGCATTAGATGCAGAATCAGAAAGAGTTGTTCAAGATGCATTAGACAGAGTAATGGTGAATAGAACCACTGTGATAGTGGCACATCGTTTATCTACAATAAAGAATGCAAATGTTATTGCAGTGATGAAAAATGGAGTTATTGTTGAAAAGGGAAGACATGACACACTGATAAACATTGAGGGTGGATACTATTCTTCCTTAGTCCAACTTCATGCAAGTACTTCAACTGTATGA 3834 0.4142 MDSENGEEHKHEETSAPENPSETNTNGENSKQKEKAETVPYFRLFSFADSTDIMLMVVGTIGAMGNGIAMPIMTILLGQVINTFGSNQTNNANVVDDVSKICLKFVYLAMGTGVAAFLQVSSWMATGERQAARIRGMYLKAILRQDISFFDMETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLMSAFIGGFVIAFVRGWLLTLVLMSTIPLLVVSGATMALAIGKTSSRGQKAYAKAANLVEQTIGSIRTVASFTGEKQAVSSYSTFLEDSYKSGVQEGFVAGTGLGTIMFFIFCLYALAVWYGAKLIMENGYNGGRVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPNIDAYDPNGKTIEDIHGEIELRDVYFSYPARPEELIFDGFSLQISSGSTTALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINVKEFQIRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATVEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIQSGKMVEKGTHIELLKNPGGAYSQLIRLQEERNESGESADHQNKRELSSGSLKHSSRPGSLRRSGSSVGNSSSHSFSAPFSLPTGVNIPGPESEHSETKEKPGKVPIGRLAALNKPEIPVLLIGCVGSIANGAIFPVFGLLLSSVIKIFYEPFHELKKDSKFWSLMFVALGLASLVAIPTRMHFFSVAGSKLIQRIRLICYEKVINMEVGWFDEPENSSGAIGARLSTDAALVRALVGDALGLLVENIATALTGLIIAFTASWQLAFIVVVFIPFIGLNGYIQIKFMKGFSADAKIMYEEASQVANDAVGSIRTVASFCSEEKVMELYRKKCEGPMKAGIRQGLISGTGFGVSFFLLFCVNALCYYVGARFVDAGKATFSDVFRVILALTFTANGISQSSSLAPDSSKAKSAIVSIFGIIDRKSKIDPSNESGTTLDSIKGEIELRHVSFKYSSRPDIPIFRDLSLTIHSGMTVALVGESGSGKSTVISLLQRFYDPDSGHITFDGVDIQNLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGIATEAEIIAAAELANAHNFISGLQQGYDAIVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVIVAHRLSTIKNANVIAVMKNGVIVEKGRHDTLINIEGGYYSSLVQLHASTSTV* 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0950 1277 CDD ABC_MTABC3_MDL1_MDL2 1032 1270 - -
Lan16g0950 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 618 IPR027417 -
Lan16g0950 1277 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 15 1273 - -
Lan16g0950 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 711 997 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0950 1277 SUPERFAMILY ABC transporter transmembrane region 43 364 IPR036640 GO:0005524|GO:0016021
Lan16g0950 1277 ProSitePatterns ABC transporters family signature. 1172 1186 IPR017871 GO:0005524
Lan16g0950 1277 Pfam ABC transporter 399 547 IPR003439 GO:0005524
Lan16g0950 1277 Pfam ABC transporter 1051 1200 IPR003439 GO:0005524
Lan16g0950 1277 PANTHER - 15 1273 - -
Lan16g0950 1277 MobiDBLite consensus disorder prediction 620 692 - -
Lan16g0950 1277 CDD ABC_6TM_Pgp_ABCB1_D2_like 700 1015 - -
Lan16g0950 1277 MobiDBLite consensus disorder prediction 1 17 - -
Lan16g0950 1277 SUPERFAMILY ABC transporter transmembrane region 693 1012 IPR036640 GO:0005524|GO:0016021
Lan16g0950 1277 MobiDBLite consensus disorder prediction 1 35 - -
Lan16g0950 1277 ProSitePatterns ABC transporters family signature. 519 533 IPR017871 GO:0005524
Lan16g0950 1277 Gene3D - 378 635 IPR027417 -
Lan16g0950 1277 CDD ABC_6TM_Pgp_ABCB1_D1_like 56 341 - -
Lan16g0950 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1032 1269 IPR003439 GO:0005524
Lan16g0950 1277 SMART AAA_5 407 579 IPR003593 -
Lan16g0950 1277 SMART AAA_5 1059 1252 IPR003593 -
Lan16g0950 1277 Pfam ABC transporter transmembrane region 710 981 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0950 1277 Pfam ABC transporter transmembrane region 57 331 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0950 1277 MobiDBLite consensus disorder prediction 620 640 - -
Lan16g0950 1277 Gene3D ABC transporter type 1, transmembrane domain 102 1006 IPR036640 GO:0005524|GO:0016021
Lan16g0950 1277 MobiDBLite consensus disorder prediction 641 671 - -
Lan16g0950 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 616 IPR003439 GO:0005524
Lan16g0950 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0950 1277 Gene3D - 1022 1276 IPR027417 -
Lan16g0950 1277 CDD ABC_MTABC3_MDL1_MDL2 380 618 - -
Lan16g0950 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1265 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0950 Lan-Chr16 16568804 16576212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0950 31 1276 Calmodulin-binding Proteins AT2G36910 44.909 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0950 K05658 - gmx:100800034 1969.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0940 4 11800917 11808307 Lan16g0950 16 16568804 16576212 LSH