Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0939 ATGGATGCTAAAGATATTTTAGGATTGTCCAAAAATTCATTCCCATCATTGGAGAAGAAATCTCGTCCTCATAAAGAATCTCAGAGAAAACCAGATGGCATTTCACGTGAGGTATATGCACTTACTGGTGGATTGCCATCTCTTATGCCTTCAATTGATGCCTCTCATTTGAAAAAAAAGCCTCCTTCTAATGAAAAGATCACTTGGCAATGGCTTCCTTTCACTAGTTCCGCTCGTAAAGATAATCTTCAACTTTACCATTGGGTTCGGATAATCAATGGTGTTCCCCCAACGGGAGACTATTCCTTTGCTAAGTATAACAAGTCTGTTGAGATTATCAAATACACAGAGGAGGAGTATGAGAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAGATCAACTATTTGATTTGTGTGAGAGGTTTGATCTCCGATTTGTTGTAATAGCTGATAGGTTCCCGTCATCTCGGACTGTAGAGGAATTAAAGGATAGGTATTATAGTGTATGCCGTGCTTTATTAATTGCTAGAGCTCCATCTCCTGGGGACGTTGCAGCACATCCTGTTGTTAAGGAACCATATAATGTTTCACAAGAGATAGAGCGAAAACGAGCACTGTCCATGGTGCTCTCTCAAACAAGGCAACAAGAGCGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCCGAGTTACGCATGCCTGCTAAGGCTGCCGAAGAGTCTCAGTTAGCCGTTGCCTCAAATCCTGGTGCAGAAGTTTTAGAGAGAACTGTCCCTGGTGAAACTGCACCTTCCACATTGACTGATAATGCAGCGATTCTAGCTTCTCTTCGAACTCTTCGTGTATATTTGAGAACATATGCACTCGATCAAATGGTGCAAGCTGCGAGCTCGTCTGCTGGACTTCGGACTATAAAACGAGTTGAGCAAACATTGCACGACCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGCACAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTTACTGAATCTTCAGAAGCAGGTGCAATATAAAGAGGCTGAAGGTTCATCTTTTCGTGATGGGTCATTTTGTGAATCACCGGGCACACCAAAGGATCGGACATTTATTCCAGAATTTATGAGCTTTGGAGGGGAAAGGGTTGCCAAAAAGGACCACAAACGAAAGGGACATGGAGCTCCTTCACCATCTGCTCATAAAAGACCTAGAAAAATGAAGGCGACGGATCTTTAG 1266 0.4242 MDAKDILGLSKNSFPSLEKKSRPHKESQRKPDGISREVYALTGGLPSLMPSIDASHLKKKPPSNEKITWQWLPFTSSARKDNLQLYHWVRIINGVPPTGDYSFAKYNKSVEIIKYTEEEYEKYLTDPMWTKEETDQLFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVCRALLIARAPSPGDVAAHPVVKEPYNVSQEIERKRALSMVLSQTRQQERRDEEVLVEAKRIAELRMPAKAAEESQLAVASNPGAEVLERTVPGETAPSTLTDNAAILASLRTLRVYLRTYALDQMVQAASSSAGLRTIKRVEQTLHDLGVNLKPRVPTKAVCTEHLELRKEILTLLNLQKQVQYKEAEGSSFRDGSFCESPGTPKDRTFIPEFMSFGGERVAKKDHKRKGHGAPSPSAHKRPRKMKATDL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0939 421 SMART sant 125 174 IPR001005 -
Lan16g0939 421 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 301 364 IPR008468 GO:0005634|GO:0045892
Lan16g0939 421 Gene3D - 98 183 - -
Lan16g0939 421 CDD SANT_DMAP1_like 129 172 - -
Lan16g0939 421 MobiDBLite consensus disorder prediction 391 421 - -
Lan16g0939 421 MobiDBLite consensus disorder prediction 1 36 - -
Lan16g0939 421 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 421 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lan16g0939 421 SUPERFAMILY Homeodomain-like 125 176 IPR009057 -
Lan16g0939 421 MobiDBLite consensus disorder prediction 17 33 - -
Lan16g0939 421 PANTHER BNAA04G26950D PROTEIN 2 421 - -
Lan16g0939 421 MobiDBLite consensus disorder prediction 395 412 - -
Lan16g0939 421 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0939 Lan-Chr16 16450252 16456000 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan16g0939 DMAP1 3.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0939 K11324 - gmx:100818926 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0939 16 16450252 16456000 Lan2g0230 2 1892757 1897732 LSH