Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0936 ATGGAAAAGAAAGAGATTATGATGATGGGTTTGAAGATGGAGGATAGTTTGAATATTAATGGATCTTCTCCCTTCATTCCTTTCTCTACCATGTTTGATTTCTGTGAAGTGGAAAAGAATTCATCTTTAGGGTTTATGGAGTTACTTGGTGTTCAAAATAGTGATCCTCTATTTGATTTTCCTCAACTATCAACTATGTCTTCCATTCTCAAAGATCAACAAGAGATAACATTGAAAGAGTGTTTTGAGGTTTTGAACACTCACCAACCTTCCACTCCAAACTCTTCATTCATTTCATCTGCATCCAATGAAGTAGTCAATGATGAACACAATAAAATTGTTGAACAATTACATGAAAAACAAAACACCAACAAAAAGTCAAAGACCAAGAAGACAAATGAGAAGAGAAAAAGAGAACCTAGATTCGCGTTCATGACTAAAAGTGAAGTTGATCATCTTGAAGATGGGTATAGATGGAGAAAGTATGGTCAAAAAGCTGTGAAAAATAGCCCATTTCCTAGGAGCTATTATCGTTGCACCAATACTTCATGTAATGTAAAGAAACGTGTAGAACGGTCTTTTACCGATCCAAGCATTGTAGTTACAACTTATGAAGGCAAACACACACATTCAAGCCCAGTTATGGCTAGAACAAGCACCAACTTTGGTTCAATAATGCATGGTGGAAATTACGTATCTCAATATTATCAACACCAAAAACACCAACTCTTCAATACAATGTCCTCTTTTGGTTTCTCTTCTTCTTCTTCTTCAACAACATCTTCAAAGGTTAGTAGTACTTTTTCTCAAGAGGTGCCCTTTTCAAGGGATAATGGGCTTCTTCAAGATATTGTTTATTCACATATTTGA 870 0.3529 MEKKEIMMMGLKMEDSLNINGSSPFIPFSTMFDFCEVEKNSSLGFMELLGVQNSDPLFDFPQLSTMSSILKDQQEITLKECFEVLNTHQPSTPNSSFISSASNEVVNDEHNKIVEQLHEKQNTNKKSKTKKTNEKRKREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNTSCNVKKRVERSFTDPSIVVTTYEGKHTHSSPVMARTSTNFGSIMHGGNYVSQYYQHQKHQLFNTMSSFGFSSSSSSTTSSKVSSTFSQEVPFSRDNGLLQDIVYSHI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0936 289 PANTHER WRKY TRANSCRIPTION FACTOR 1 263 - -
Lan16g0936 289 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 263 IPR044810 GO:0003700
Lan16g0936 289 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0936 289 SUPERFAMILY WRKY DNA-binding domain 145 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0936 289 ProSiteProfiles WRKY domain profile. 148 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0936 289 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0936 289 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0936 289 MobiDBLite consensus disorder prediction 116 139 - -
Lan16g0936 289 PIRSF WRKY_txn_fact_IIc 1 289 IPR017396 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0936 Lan-Chr16 16416092 16418679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0936 30 289 WRKY Transcription Factor Family AT2G47260 42.006 3.51e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0936 WRKY 2.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0936 - - gmx:100816452 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0936 16 16416092 16418679 Lan8g0392 8 6069342 6071124 PCT
Lan16g0936 16 16416092 16418679 Lan20g0548 20 4132272 4134027 PCT
Lan16g0936 16 16416092 16418679 Lan4g1359 4 22523194 22525095 PCT
Lan8g0392 8 6069342 6071124 Lan16g0936 16 16416092 16418679 PCT
Lan20g0548 20 4132272 4134027 Lan16g0936 16 16416092 16418679 PCT
Lan4g1359 4 22523194 22525095 Lan16g0936 16 16416092 16418679 PCT